PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0162.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 310aa MW: 33726.6 Da PI: 7.2429

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0162.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.2e-16	32	79	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell ++++q G g W+t +++ g+ R++k+c++rw +yl Kaladp0039s0162.1.p 32 RGPWTAEEDELLTKCINQQGEGKWRTLPKRAGLVRCGKSCRLRWMNYL 79 89****************************99**********97 PP
2	Myb_DNA-binding	47.1	5.7e-15	90	130	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Kaladp0039s0162.1.p 90 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 130 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MRNPSSSASS SPANEKKKSS RNSSGKMVGL KRGPWTAEED ELLTKCINQQ GEGKWRTLPK 60 RAGLVRCGKS CRLRWMNYLH PSVKRGQIAP DEEDLILRLH RLLGNRWSLI AGRIPGRTDN 120 EIKNYWNTHL SKKLISQGID PKTHKPLLET TCTAAAATKN PKLKSVVAAK DGKNSDSDIS 180 GSSKIVTTTT PTSSGQNPNP YRHRHSGSVM DDGLEEDQMV VGHGGYGNNA HEADGAGHHY 240 FHQSDLDLED GVGGGYHVNL QLSPQGLSNE DVHHHGGGDG MINCEGMVEE DDGVLTSFLD 300 SLINDDMFV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	1e-71	MYB family protein