PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0038s0140.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HSF

Protein Properties

Length: 440aa MW: 50296 Da PI: 5.6517

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0038s0140.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.2	7e-35	16	106	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 Fl k+ye+++++++++++sws+n +sf+v+++ ef +++Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF +++F kg++ Kaladp0038s0140.1.p 16 FLLKTYEMVDNPSTDSIVSWSANARSFIVWNPPEFCRDLLPQYFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFGNDEFIKGQR 96 9*************************************************************9998.........********* PP XXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkk 101 +ll++i+r+k Kaladp0038s0140.1.p 97 HLLKNIHRRK 106 ******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MDGSQQQQQG GAPAPFLLKT YEMVDNPSTD SIVSWSANAR SFIVWNPPEF CRDLLPQYFK 60 HNNFSSFIRQ LNTYGFRKID PEQWEFGNDE FIKGQRHLLK NIHRRKPIHS HSVQNQTHMN 120 PLAESERQEF ENEIQRLRRD NDLLLLKTQR HDQERCDFEI QIQSLMDRAQ IIEQRQVEMV 180 AFLARQFKKP EFASTFSRLS EKNNKKRRLS GYNDLFGDDN IISDGLLTMK KKNVDPFSSS 240 LSNWGLIEKL DSSFSYWENI LYLISQEMGE APFDDPSRAL CPPAAHLEMT RSSADSDTND 300 ESCSPVLCPS SPNSLGIHQS LEITGSVRNV DSPAISFNLG VDSQPKASDV DVNIKPASPR 360 GSKTNNPSQL NGKNDLFWEQ FLTETPIVGN TQEAESRRRD VHDTKIDDKP SAPVGFWWKT 420 NDVDNITERM GHLTPTERT*

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MDGSQQQQQG GAPAPFLLKT YEMVDNPSTD SIVSWSANAR SFIVWNPPEF CRDLLPQYFK  60
HNNFSSFIRQ LNTYGFRKID PEQWEFGNDE FIKGQRHLLK NIHRRKPIHS HSVQNQTHMN  120
PLAESERQEF ENEIQRLRRD NDLLLLKTQR HDQERCDFEI QIQSLMDRAQ IIEQRQVEMV  180
AFLARQFKKP EFASTFSRLS EKNNKKRRLS GYNDLFGDDN IISDGLLTMK KKNVDPFSSS  240
LSNWGLIEKL DSSFSYWENI LYLISQEMGE APFDDPSRAL CPPAAHLEMT RSSADSDTND  300
ESCSPVLCPS SPNSLGIHQS LEITGSVRNV DSPAISFNLG VDSQPKASDV DVNIKPASPR  360
GSKTNNPSQL NGKNDLFWEQ FLTETPIVGN TQEAESRRRD VHDTKIDDKP SAPVGFWWKT  420
NDVDNITERM GHLTPTERT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	232	KKRRLSGYNDLFGDDNIISDGLLTMKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	2e-82	HSF family protein