PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0484.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 261aa    MW: 28752.2 Da    PI: 5.4158
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0484.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.3e-151966148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W+ eEd +lv +v+++G  +W+  ++  g+ R++k+c++rw++yl
  Kaladp0037s0484.1.p 19 KGAWSVEEDIKLVAYVTKYGCWNWRQLPKFAGLARCGKSCRLRWLNYL 66
                         79******************99************************97 PP
2Myb_DNA-binding47.73.5e-1572114145
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                          rg+ T+eE++ ++++++  G++ W+ Ia+ ++ gRt++++k++w+
  Kaladp0037s0484.1.p  72 RGNYTKEEEDTIIRLHESVGNK-WSVIAAQLP-GRTDNEIKNHWH 114
                          899*******************.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGRRPATATA APIESGLRKG AWSVEEDIKL VAYVTKYGCW NWRQLPKFAG LARCGKSCRL  60
RWLNYLKPDL KRGNYTKEEE DTIIRLHESV GNKWSVIAAQ LPGRTDNEIK NHWHGKLKKM  120
LKTTPSLKDK SKATSSSLTS EEVSSTCSTY KGLTDLEADK TPTDDSVSCC LQGQQKQSSS  180
SSASSSSDDM YSDMSGDLWK DPFVADGAYN YVGPADDYFH YVDSFAAAAD IGYEGLLSFP  240
CPSDVPTADE DEFLVPLWLA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06180.16e-52MYB family protein