PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0422.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 318aa    MW: 34500.1 Da    PI: 6.8474
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0422.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.58.4e-07272299330
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                           +h+ +Er RR++i +++  L+el+P +
  Kaladp0037s0422.1.p 272 NSHSLAERVRREKISERMKLLQELVPGC 299
                          58************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MGGDADDGKV DLGFQQNSNK STMSCSTSGM NTNPLPNKVS GIAMSSIPMF KSSAGSDPHF  60
GTHWDPLLAI HQNENFGGGS SMVSHCGYAN PPYPIDNQGM SGTHLLQYPS SDSTLVDLPK  120
IQRFGSGNFV DMAGLYGLPA LGATASSSCY QNYLSNHEVG IHRHSTDRAG SQDDCQVSEE  180
RALEASPNGK RRRSVESASA LNSNKMTEGE QQKDMSEGSF DQPSEQDDEK QNQIRRLQNK  240
QSGKQAKDNS QTEDGTKDTY IHVRARRGQA TNSHSLAERV RREKISERMK LLQELVPGCN  300
KVDKKTLIAL TKPLDCG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.16e-36bHLH family protein