PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0037s0297.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HB-other

Protein Properties

Length: 538aa MW: 59952.6 Da PI: 8.2041

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0037s0297.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63	4.3e-20	24	79	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 rkR t+ qle+Lee++e ++yp+ ++r +A+k+gLte+qV+ WF+ rR k+k+ Kaladp0037s0297.2.p 24 RKRKLKTPAQLEALEEYYEDHKYPTDSMRSAIAEKIGLTEKQVSGWFCHRRLKDKR 79 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MEDSDADSLD GRAEEDKTPV ETSRKRKLKT PAQLEALEEY YEDHKYPTDS MRSAIAEKIG 60 LTEKQVSGWF CHRRLKDKRL SKDETLGSGR MERSSGVIQE HFSGPGQDSC GSTKPGEYKN 120 ADMRDVESQL LAGQELSPMK LAYHNRMNTG SLDGDMDDTS SESSSPLRPS HLPQRDVPQR 180 WENLRYSIPK GPAVPSNPKV AIGGQFRRPS GYLKIKPKAE HPAITAVKRQ LGMNFRVDGP 240 PLGIEFQPPP VDAFQAGPKD TATGPRDGIG SLVPNISGSS YHGAQFRRKM HDGSFKPDHS 300 YLKEEGPRVN HGSELFYSHH QSRPKYSVSD NIKLDHGWGP SPNLDKEYAE EAYGSKRNLF 360 NEEKYGSKGL RIQPISSVPF QPSHNISGVN PMIAQRSKYL KNKLSDTKSR QREPRDTFER 420 RMYAREPEIE KHHSVSSNTS ERPNLIPVTA TPEYKLMDKQ LVAARNDPVE YPNPNSEQIG 480 VYNNELKDKK ARFGYSQPDF GKTMSLAINR GKGAAGAIPS SFSEDETGET SSSGDDE*

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MEDSDADSLD GRAEEDKTPV ETSRKRKLKT PAQLEALEEY YEDHKYPTDS MRSAIAEKIG  60
LTEKQVSGWF CHRRLKDKRL SKDETLGSGR MERSSGVIQE HFSGPGQDSC GSTKPGEYKN  120
ADMRDVESQL LAGQELSPMK LAYHNRMNTG SLDGDMDDTS SESSSPLRPS HLPQRDVPQR  180
WENLRYSIPK GPAVPSNPKV AIGGQFRRPS GYLKIKPKAE HPAITAVKRQ LGMNFRVDGP  240
PLGIEFQPPP VDAFQAGPKD TATGPRDGIG SLVPNISGSS YHGAQFRRKM HDGSFKPDHS  300
YLKEEGPRVN HGSELFYSHH QSRPKYSVSD NIKLDHGWGP SPNLDKEYAE EAYGSKRNLF  360
NEEKYGSKGL RIQPISSVPF QPSHNISGVN PMIAQRSKYL KNKLSDTKSR QREPRDTFER  420
RMYAREPEIE KHHSVSSNTS ERPNLIPVTA TPEYKLMDKQ LVAARNDPVE YPNPNSEQIG  480
VYNNELKDKK ARFGYSQPDF GKTMSLAINR GKGAAGAIPS SFSEDETGET SSSGDDE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-56	HB-other family protein