PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0171.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 573aa MW: 62856 Da PI: 6.8958

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0171.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00047	458	490	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++ L++++ + +K + a++L++A+ YIk q Kaladp0036s0171.1.p 458 EKISALQQIVSPY-----GKTDTASVLQEAIGYIKFHQ 490 5789999999988.....9****************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MADQDCNNIN LLPLALSSSP SSWWDLHHHA TPTPSITSWN NTSTAAAAAA ASLWENHNHS 60 NSSPCDQEDV SISVSNHSSL TVDDSSHRLV EPSASSSNNI IGQPTTENNS HLWSQLLLGV 120 GGSQEMHDEM GENLLNALSL KNFSGGMFEP SACSDYLKKF DSHQHEKWAD SNGDQFRNSN 180 PATAANSSFT RNFDNTNVGY NGDTNLAENN DDQRSLIKLS SSNLVNSWSI APPDLSQMTF 240 HHLVPNPCNN NILPSIDQYL HPDITGDQTK QNLSYQPQLL DMAPNSIYDC ASYGVSQTRS 300 GNDHYEESDQ VGSSQASLFP KVFINNFESI YGSTGGNWRP RESSIHSQHG FTPSVIDPFS 360 NSRSRSLSKP LLKSLSLLDT RKQQGTNLTN SLINNKSNGR GQGASANDGK KKRSQEASQS 420 SGSSSRKPKR ESNSYNPSTA SSFTKTTTQT PKVKIAAEKI SALQQIVSPY GKTDTASVLQ 480 EAIGYIKFHQ EQVQLLSNPY LKSNVNKLQT CMMQEAWGSL DRKYEKGEKN KLKVVDLKSK 540 GLCLVPTSSI PQVYKDNSGP DYWPTYRGCL YR*

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MADQDCNNIN LLPLALSSSP SSWWDLHHHA TPTPSITSWN NTSTAAAAAA ASLWENHNHS  60
NSSPCDQEDV SISVSNHSSL TVDDSSHRLV EPSASSSNNI IGQPTTENNS HLWSQLLLGV  120
GGSQEMHDEM GENLLNALSL KNFSGGMFEP SACSDYLKKF DSHQHEKWAD SNGDQFRNSN  180
PATAANSSFT RNFDNTNVGY NGDTNLAENN DDQRSLIKLS SSNLVNSWSI APPDLSQMTF  240
HHLVPNPCNN NILPSIDQYL HPDITGDQTK QNLSYQPQLL DMAPNSIYDC ASYGVSQTRS  300
GNDHYEESDQ VGSSQASLFP KVFINNFESI YGSTGGNWRP RESSIHSQHG FTPSVIDPFS  360
NSRSRSLSKP LLKSLSLLDT RKQQGTNLTN SLINNKSNGR GQGASANDGK KKRSQEASQS  420
SGSSSRKPKR ESNSYNPSTA SSFTKTTTQT PKVKIAAEKI SALQQIVSPY GKTDTASVLQ  480
EAIGYIKFHQ EQVQLLSNPY LKSNVNKLQT CMMQEAWGSL DRKYEKGEKN KLKVVDLKSK  540
GLCLVPTSSI PQVYKDNSGP DYWPTYRGCL YR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	5e-37	bHLH family protein