PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0036s0077.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YC
Protein Properties Length: 255aa    MW: 28680.6 Da    PI: 5.8175
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0036s0077.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC174.41.1e-54701731101
                NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd 87 
                          ql+sfw++q   ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fi+eltlrsw+h+eenkrrtl+k+diaaa+ rtd
  Kaladp0036s0077.1.p  70 QLQSFWANQhqeIERVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFIFELTLRSWNHTEENKRRTLQKNDIAAAIGRTD 159
                          89*****999999***************************************************************************** PP

                NF-YC  88 ifdflvdivprdel 101
                          ifdflvdivpr++l
  Kaladp0036s0077.1.p 160 IFDFLVDIVPREDL 173
                          ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDHQGQGQQP AMGTVDNSAQ MSYAMPPYQP NQMTGAAPGA ASAQAGGQLP QHQLAYQHIN  60
PLQQQQLQQQ LQSFWANQHQ EIERVTDFKN HSLPLARIKK IMKADEDVRM ISAEAPVIFA  120
RACEMFIFEL TLRSWNHTEE NKRRTLQKND IAAAIGRTDI FDFLVDIVPR EDLKDEMLGS  180
IPRGSIPVGA PADMLPYPYM PMQHMPQVGT PGMIMGKPMM DPSMYAQQPH PYMAPQMWPQ  240
PQQQQQQEQS SSDQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143149RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.32e-79NF-YC family protein