PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0034s0237.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 160aa MW: 17492.7 Da PI: 10.4592 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.4 | 4.8e-15 | 31 | 79 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 ++G+r ++ +gr++AeIrd ++ ++r++lg+f++ e A ++aa+++l+ Kaladp0034s0237.1.p 31 NFRGIRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSVEAATTTYDAAARSLR 79 69*******.**********883....5**********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MGKVRGGATG AASLGNQVKD APLEIGSAEP NFRGIRKRPW GRFAAEIRDP WKKTRVWLGT 60 FDSVEAATTT YDAAARSLRC PKARTNFPTP LSSSIVFIFH RVAFEPSSSI VFMFGVVFES 120 SSSSSEPSSN ISKFNSSSSS SRAELELKKN YRAEFEHYV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 2e-29 | ERF family protein |