PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0034s0229.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 329aa    MW: 38498.6 Da    PI: 4.8999
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0034s0229.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind911.4e-28351342101
                          HHHHHHHHHCTGGGTTTSEESSSS........SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEE CS
         HSF_DNA-bind   2 Flkklyeiledeelkeliswseng........nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkh 83 
                          Fl k+y++++d++++++isws+++        +sfv++d+++f++++Lp+yFkh+nf+ F+RQLn YgFkkv+ ++         weF++
  Kaladp0034s0229.1.p  35 FLAKTYHLVDDPTTDQVISWSQDNnnssssssSSFVIWDPRTFSSTILPTYFKHTNFSNFIRQLNSYGFKKVNPDR---------WEFAN 115
                          9********************6555788888889***************************************999.........***** PP

                          SXXXXXXXXXXXX.XXXXX CS
         HSF_DNA-bind  84 ksFkkgkkellek.ikrkk 101
                            F +g+ +l+++ +kr++
  Kaladp0034s0229.1.p 116 AGFIRGHGHLMRTsMKRRA 134
                          ********99976477776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MNPAREAVPV EEGSASNSDR AQAAERVHES QPPPFLAKTY HLVDDPTTDQ VISWSQDNNN  60
SSSSSSSSFV IWDPRTFSST ILPTYFKHTN FSNFIRQLNS YGFKKVNPDR WEFANAGFIR  120
GHGHLMRTSM KRRARQMQSS DVEPCPKFEE PGFDREVHRL RRDRQILMTE LVKLRQLQKT  180
TRAHIRSMEQ RLRKTELKQQ QTTRFLAKAI RNPDFMQRFS GAKDTREEDE HSFSTEMRST  240
DQEEPGALRG FTEKEIQDYV DISDYEVSDV VVWEKENVLP VAEEGEHDQE QLVGEFLNDW  300
IKEELRQVNV EEEYEDVQAD HLEMICFEE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159164RLRRDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.13e-70HSF family protein