PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0034s0224.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CPP

Protein Properties

Length: 746aa MW: 80718.1 Da PI: 6.3879

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0034s0224.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.6	7.8e-16	447	485	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C +C C++C+Nk Kaladp0034s0224.1.p 447 SCKRCNCKKSKCLKLYCECFAAGVYCIGTCACQNCFNKP 485 689**********************************96 PP
2	TCR	49.4	9.4e-16	532	570	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN Kaladp0034s0224.1.p 532 RHKRGCNCKKSSCLKKYCECYQGGVGCSVNCRCESCKNV 570 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 746 aa Download sequence
MDTPERNQIG SSLSKHEDSP VFNYLSNLSP IKPMKSAPIT QTFTTLNFSS LPSIFTSPHV 60 SSHKESRFLL RRHNTPDKSQ SEFSSYIDVS SNKENDVFVD VNQLHNCSSE LQKVSDTLDS 120 VGRAPLEPLH EESDLSIDLS HNLKNDCGSP DSEGKAARDE ASQSAEAATS SVMLDQGPSI 180 SLPAVHETPS GWESLISDGA DLLMFDSPNI AAGLKELFKS PPVEHMGSSF ASQFHQDTPD 240 FLKSDPAFLV DVGELQNETY HHAETEVIDC ARDDFPSTMT GCMTSHPSEN VDDESMMSLH 300 RGVRRRCLVF DTKGAQRKSL IGASSSNPSM CMNDNKKRDA SKIGGSSALC ILPGIGLHLN 360 ALATSGDRGG GQVSVSSSAT TFQSPATAHE SVLDVFSGAS SQENADSGII QCSEDACLAP 420 GLVSLDDINQ NSPRKKRRKP ESSGDESCKR CNCKKSKCLK LYCECFAAGV YCIGTCACQN 480 CFNKPVHEDT VLATRKQIES RNPLAFAPKV IRTSDPLPDI KDEVMNTPAS ARHKRGCNCK 540 KSSCLKKYCE CYQGGVGCSV NCRCESCKNV FGTKDGSAPV AVATQDGDEE EETEKVEMNN 600 KGLQSVMPHN NEEHNPNTFL ATPLRLTRMS MQLPFSSKGK PPRSSFLAVD SASGLQASQK 660 FSKPNYVNPP PKFQRNYPAG QDETEMPEML RNNGSPISAV KTSSPNSKRV SSPHSNFGSS 720 PAPRSTRKLI LQSIPSFPSL TQPAD*

Sequence ? help Back to Top

Protein Sequence Length: 746 aa Download sequence

MDTPERNQIG SSLSKHEDSP VFNYLSNLSP IKPMKSAPIT QTFTTLNFSS LPSIFTSPHV  60
SSHKESRFLL RRHNTPDKSQ SEFSSYIDVS SNKENDVFVD VNQLHNCSSE LQKVSDTLDS  120
VGRAPLEPLH EESDLSIDLS HNLKNDCGSP DSEGKAARDE ASQSAEAATS SVMLDQGPSI  180
SLPAVHETPS GWESLISDGA DLLMFDSPNI AAGLKELFKS PPVEHMGSSF ASQFHQDTPD  240
FLKSDPAFLV DVGELQNETY HHAETEVIDC ARDDFPSTMT GCMTSHPSEN VDDESMMSLH  300
RGVRRRCLVF DTKGAQRKSL IGASSSNPSM CMNDNKKRDA SKIGGSSALC ILPGIGLHLN  360
ALATSGDRGG GQVSVSSSAT TFQSPATAHE SVLDVFSGAS SQENADSGII QCSEDACLAP  420
GLVSLDDINQ NSPRKKRRKP ESSGDESCKR CNCKKSKCLK LYCECFAAGV YCIGTCACQN  480
CFNKPVHEDT VLATRKQIES RNPLAFAPKV IRTSDPLPDI KDEVMNTPAS ARHKRGCNCK  540
KSSCLKKYCE CYQGGVGCSV NCRCESCKNV FGTKDGSAPV AVATQDGDEE EETEKVEMNN  600
KGLQSVMPHN NEEHNPNTFL ATPLRLTRMS MQLPFSSKGK PPRSSFLAVD SASGLQASQK  660
FSKPNYVNPP PKFQRNYPAG QDETEMPEML RNNGSPISAV KTSSPNSKRV SSPHSNFGSS  720
PAPRSTRKLI LQSIPSFPSL TQPAD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	433	440	PRKKRRKP
2	435	439	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-116	CPP family protein