PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0034s0177.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 489aa MW: 53371.1 Da PI: 6.4365

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0034s0177.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.1	3.7e-14	327	373	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn Er+RR +iN+++ L++l+P + K++Ka++L +A+eY++ Lq Kaladp0034s0177.1.p 327 VHNLTERKRRGKINEKMRALQDLIPYC-----NKVDKAAMLDEAIEYLRVLQ 373 5***********************8.....6**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MSFPEFYCEK MRPNQLKIPR SADKQQTSMP AGNSDYGELV WENGQIVIKG GQSREVSRFP 60 NKGSFINSKT GKSGSRFGFD EVVAGGGEAD SDMLSWFYHL DDTLPHESTS GFSAEIFGVT 120 SDVLPVSHSV NKLSNPVKGS ASFALDSKTE LSDSLSLTYS GXXXXXXXXG RSYSHAKNFP 180 HFSWSAARSK NNLISDGARA SGRFVTRETA AATEEMLVDT NDQTIDVMTK DLPGRPVERP 240 ASAFRAEGGL KVNQVSRNAQ MERMDADMIK KPAAAALPSL CSDNGGVNRL KRKHRDEEDW 300 EDSSEDAEEE SAIIKKVGSK RSRPTEVHNL TERKRRGKIN EKMRALQDLI PYCNKVDKAA 360 MLDEAIEYLR VLQLQVQMMT MRAQMCALPM MAQPGLQHPY TTAPSSQFLP LGMGYQAGAL 420 DMTTGFPAQA ACFPGQFKPP PIFWNAAQGL PTSMPGLLVP MPGAPTTPAP GSADETPNSK 480 DPLHEEAV*

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MSFPEFYCEK MRPNQLKIPR SADKQQTSMP AGNSDYGELV WENGQIVIKG GQSREVSRFP  60
NKGSFINSKT GKSGSRFGFD EVVAGGGEAD SDMLSWFYHL DDTLPHESTS GFSAEIFGVT  120
SDVLPVSHSV NKLSNPVKGS ASFALDSKTE LSDSLSLTYS GXXXXXXXXG RSYSHAKNFP  180
HFSWSAARSK NNLISDGARA SGRFVTRETA AATEEMLVDT NDQTIDVMTK DLPGRPVERP  240
ASAFRAEGGL KVNQVSRNAQ MERMDADMIK KPAAAALPSL CSDNGGVNRL KRKHRDEEDW  300
EDSSEDAEEE SAIIKKVGSK RSRPTEVHNL TERKRRGKIN EKMRALQDLI PYCNKVDKAA  360
MLDEAIEYLR VLQLQVQMMT MRAQMCALPM MAQPGLQHPY TTAPSSQFLP LGMGYQAGAL  420
DMTTGFPAQA ACFPGQFKPP PIFWNAAQGL PTSMPGLLVP MPGAPTTPAP GSADETPNSK  480
DPLHEEAV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46970.1	9e-30	bHLH family protein