PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0034s0058.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 487aa MW: 53867.1 Da PI: 5.9048

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0034s0058.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.9	2e-09	308	354	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +++ e+ErrRR+ri+++ ++Lr l+P+ + K++ a+i A+ YI +L Kaladp0034s0058.1.p 308 AKNLEVERRRRSRIKDGEFQLRALVPNiS------KMDRASIIGDAITYIIEL 354 56779********************66......*************887 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MFEFGVGEME TAVREMRGLE RAVEWLRPFV EQHGWDYCVI WKSGGDPSRY VEFVDCCCAG 60 GYVSGDVKLE KSGDQNGVAS PVCRDVHVEH PIRTKACETL AQIPAALPLY SGIHSDVAIT 120 NQPNWLSEDD RTLVLIPLGG GLIELFAAKL VEKDQTTIDF IRYQYTVSLE HDALLNHLHP 180 NVDQVVHETE LGHCLQNSSP GVLFIDTAPK LQPVVPLKKP QTRASFPGSS TGSNPPNENP 240 SMDSSFGHLS QDASLPPSSS NSPCSKKPKI CENFSKSQPG AASAPGNIVF EKGNPKFGHK 300 PGKEGSKAKN LEVERRRRSR IKDGEFQLRA LVPNISKMDR ASIIGDAITY IIELKKTVQE 360 LEQELKEEDD ENVDPSVELS GKQKAGIRFK RGIPDADLRS YSEMQVEVHQ ICGRTFLLRV 420 VAEQQPCWSS RLMQAMSSLG LHVEDANINT CHGLVLCNFR VEVNSEVQPN QLRDSLIKEL 480 DTIKMN*

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MFEFGVGEME TAVREMRGLE RAVEWLRPFV EQHGWDYCVI WKSGGDPSRY VEFVDCCCAG  60
GYVSGDVKLE KSGDQNGVAS PVCRDVHVEH PIRTKACETL AQIPAALPLY SGIHSDVAIT  120
NQPNWLSEDD RTLVLIPLGG GLIELFAAKL VEKDQTTIDF IRYQYTVSLE HDALLNHLHP  180
NVDQVVHETE LGHCLQNSSP GVLFIDTAPK LQPVVPLKKP QTRASFPGSS TGSNPPNENP  240
SMDSSFGHLS QDASLPPSSS NSPCSKKPKI CENFSKSQPG AASAPGNIVF EKGNPKFGHK  300
PGKEGSKAKN LEVERRRRSR IKDGEFQLRA LVPNISKMDR ASIIGDAITY IIELKKTVQE  360
LEQELKEEDD ENVDPSVELS GKQKAGIRFK RGIPDADLRS YSEMQVEVHQ ICGRTFLLRV  420
VAEQQPCWSS RLMQAMSSLG LHVEDANINT CHGLVLCNFR VEVNSEVQPN QLRDSLIKEL  480
DTIKMN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	5e-42	bHLH family protein