PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0033s0284.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 435aa MW: 47064.1 Da PI: 4.9246

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0033s0284.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.2e-12	98	141	8	55
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er RR+++++ f +L +l+P++ + K++K+ i+e++v+YI+ L+ Kaladp0033s0284.1.p 98 TERERRKKMRNMFGTLHSLVPNL----QSKPDKVKIVEETVNYIRTLE 141 6*******************9....79**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MEEDGKLQEE INNMFMCDCG SLSLWGCGDG NEKEMIEVAA ELEEGVNNGE ENKNREQDVE 60 LGKIVMAGGG EGDGEGGGGN DGKREDKTED PFDFRIQTER ERRKKMRNMF GTLHSLVPNL 120 QSKPDKVKIV EETVNYIRTL EQTLQTLQTK KQEKLKETRG SISFNPYSPS SSSMMPPQPH 180 PQPQMVVEPY EAISREALLT EYYLNSSSSS RSITPPNSNA PTPKGHNTTA SNSALGSPPI 240 VMIDTPPNNL SGNICGSPPI VMIDTPPSAS SLKHNPNLSG NICGSPPIVM IDTPPNACSL 300 KPNTNLSGNI WASPPIVMKP NPGPGAGETP AKVTLSPSSV AFQTFTSKNV VLCVCGPEAN 360 FNICGARKPG FYTSICSVLE KYRLEVKSLQ VSSEEHSNLT KVMFQARTTA LLDQYPVEDI 420 YRAAAVEMAH LVSS*

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MEEDGKLQEE INNMFMCDCG SLSLWGCGDG NEKEMIEVAA ELEEGVNNGE ENKNREQDVE  60
LGKIVMAGGG EGDGEGGGGN DGKREDKTED PFDFRIQTER ERRKKMRNMF GTLHSLVPNL  120
QSKPDKVKIV EETVNYIRTL EQTLQTLQTK KQEKLKETRG SISFNPYSPS SSSMMPPQPH  180
PQPQMVVEPY EAISREALLT EYYLNSSSSS RSITPPNSNA PTPKGHNTTA SNSALGSPPI  240
VMIDTPPNNL SGNICGSPPI VMIDTPPSAS SLKHNPNLSG NICGSPPIVM IDTPPNACSL  300
KPNTNLSGNI WASPPIVMKP NPGPGAGETP AKVTLSPSSV AFQTFTSKNV VLCVCGPEAN  360
FNICGARKPG FYTSICSVLE KYRLEVKSLQ VSSEEHSNLT KVMFQARTTA LLDQYPVEDI  420
YRAAAVEMAH LVSS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	128	RRKKMRNMFGTLHSLVPNLQSKPDKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	1e-11	bHLH family protein