PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0213.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 386aa    MW: 42535.8 Da    PI: 6.06
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0213.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.36.7e-09218265455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++ Lq
  Kaladp0033s0213.1.p 218 SHSLAERVRREKISQRMRFLQDLVPGC----NKITGKAGMLDEIINYVQALQ 265
                          8**************************....999****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MTSDCFGSSR NLSKSGSEMT VFERQQSQMK FLQQQHRSSA SETKYSDQVQ KIQASLEPQN  60
LTKVESGLLS PMMTTDPCLG WPELGHLSMP KRMLHSSSDY VHDQYTQEMS TLTTALSTGV  120
PYRTAMLEKE GDDSVVKESP KIRETDQWLT PKFAAESIAN EERIEKCIAE EDLNITLQSV  180
PKKGRTSIGT SKENPNTSEV TKPEYIHVRA RRGQATDSHS LAERVRREKI SQRMRFLQDL  240
VPGCNKITGK AGMLDEIINY VQALQRQVEF LSMKLAAVTA AQDYCNDPAL SYHIVSMPDA  300
PSNACLPFNQ LKASNVSAAA MTIAPASGHN SLLATAGFAA LTTWDADFQA APGIEFHQRR  360
STSFSSQPNE GDTSGMSTLS LCFDE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.12e-47bHLH family protein