PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0032s0071.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HSF

Protein Properties

Length: 501aa MW: 54286 Da PI: 5.3456

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0032s0071.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115	4.7e-36	28	119	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 Fl+k+y++++d++++ ++sws+ +nsfvv++ ef+k++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F +gkk Kaladp0032s0071.1.p 28 FLSKTYDMVDDASTDGVVSWSSGNNSFVVWNVAEFSKELLPKYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGKK 108 9**************************************************************999.........********* PP XXXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkks 102 +ll++i+r+k Kaladp0032s0071.1.p 109 HLLKTINRRKA 119 ******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MEGAAAEGGV GGGGPGGGSI GGGLPPPFLS KTYDMVDDAS TDGVVSWSSG NNSFVVWNVA 60 EFSKELLPKY FKHSNFSSFV RQLNTYGFRK VDPDRWEFAN EGFLRGKKHL LKTINRRKAP 120 HVNSPAPQIQ TAAVGACIEV GKFGLEEEVE RLKRDKNLLM QELVRLKQQQ QSTDHQLQTV 180 GSRVQMMEQR QQQMMSFLAK AMQSPGFMSQ LVQQQNESSR RITNSSKKRR LPNQDEPVFR 240 TYGDRTPDGQ VTKFQPLLNE AAASMLRQIL NMNVSAQRET SLWKPDAFLI DDVSSSLNAF 300 DSGSSSSRLS GVTLAEVTPS SALSPQLEPS FPAKGMCGGV TEVQSPPHLL AAQLQPSKYP 360 ATELLNTGAT SILPDLSDHL GLPKNIVGLP GTSIADTGAK MGSVHPMMLA GDGSPTKSNT 420 ELSDDDGAKL PGIDDVFWEQ FLSTSPLTGE TDEMSSVLDD GIAQELDITS GQEALWNRGQ 480 HVDQLTEQMG LLTSNATIRR *

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MEGAAAEGGV GGGGPGGGSI GGGLPPPFLS KTYDMVDDAS TDGVVSWSSG NNSFVVWNVA  60
EFSKELLPKY FKHSNFSSFV RQLNTYGFRK VDPDRWEFAN EGFLRGKKHL LKTINRRKAP  120
HVNSPAPQIQ TAAVGACIEV GKFGLEEEVE RLKRDKNLLM QELVRLKQQQ QSTDHQLQTV  180
GSRVQMMEQR QQQMMSFLAK AMQSPGFMSQ LVQQQNESSR RITNSSKKRR LPNQDEPVFR  240
TYGDRTPDGQ VTKFQPLLNE AAASMLRQIL NMNVSAQRET SLWKPDAFLI DDVSSSLNAF  300
DSGSSSSRLS GVTLAEVTPS SALSPQLEPS FPAKGMCGGV TEVQSPPHLL AAQLQPSKYP  360
ATELLNTGAT SILPDLSDHL GLPKNIVGLP GTSIADTGAK MGSVHPMMLA GDGSPTKSNT  420
ELSDDDGAKL PGIDDVFWEQ FLSTSPLTGE TDEMSSVLDD GIAQELDITS GQEALWNRGQ  480
HVDQLTEQMG LLTSNATIRR *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02990.1	1e-121	HSF family protein