PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0031s0138.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 393aa MW: 41630.5 Da PI: 5.2108

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0031s0138.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.2e-12	201	246	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq Kaladp0031s0138.1.p 201 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 246 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MQPGLNSLSN SAQVTPQLDL QNGSRPTPPL AQQIDNFEGP AVATQDDFLD QMLSSWNEFE 60 PQNGHASSAW DLKQDEDDAV RIGSNRASPF RFDESALLVS KLRQHQISGT TLQQQLVMPR 120 TDVGQNGAVG EGSLFAPPNP GLESSIQGLY NGFAGSLQSH PFLNSQNFGD PCGPPAGSAG 180 GAPAQPRQRV RARRGQATDP HSIAERLRRE RIAERMKALQ ELVPNANKTD KASMLDEIID 240 YVKFLQLQVK VLSMSRLGGA AAVTPLVADM SSARGSAIAK ARSSSDGARA LADEDNAMAL 300 TEQQVAKLME EDMGSAMQYL QGKGLCLMPI SLATVISTAT CQPRSSLLHN RNSNGMFVAN 360 GDGPTSPSVS VLTVQSTAFG NGVNDATSGS MP*

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MQPGLNSLSN SAQVTPQLDL QNGSRPTPPL AQQIDNFEGP AVATQDDFLD QMLSSWNEFE  60
PQNGHASSAW DLKQDEDDAV RIGSNRASPF RFDESALLVS KLRQHQISGT TLQQQLVMPR  120
TDVGQNGAVG EGSLFAPPNP GLESSIQGLY NGFAGSLQSH PFLNSQNFGD PCGPPAGSAG  180
GAPAQPRQRV RARRGQATDP HSIAERLRRE RIAERMKALQ ELVPNANKTD KASMLDEIID  240
YVKFLQLQVK VLSMSRLGGA AAVTPLVADM SSARGSAIAK ARSSSDGARA LADEDNAMAL  300
TEQQVAKLME EDMGSAMQYL QGKGLCLMPI SLATVISTAT CQPRSSLLHN RNSNGMFVAN  360
GDGPTSPSVS VLTVQSTAFG NGVNDATSGS MP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	211	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	6e-62	bHLH family protein