PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0031s0107.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 420aa    MW: 47311.1 Da    PI: 9.1689
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0031s0107.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind102.73.3e-321061982103
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                          F++k+++++ d++++ li w + +nsf+v+d+ ef+++vLp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+ 
  Kaladp0031s0107.1.p 106 FVMKTFRMVCDPATDALICWGRGSNSFLVFDPLEFSHRVLPVYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRGQV 186
                          9****************************************************************999.........************* PP

                          XXXXXXXXXXXX CS
         HSF_DNA-bind  92 ellekikrkkse 103
                          +ll++i r+k++
  Kaladp0031s0107.1.p 187 HLLRNIVRRKHS 198
                          ********9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MIRPIISYET RTIASRWIEK SPPPPKNIKR TPTGTTRLRI FNLTRPHADT LHSSTVHLPS  60
QYINSVKTQP RIAPPRPDQR SRTTREQLAE RMDQAVMDGS DTIAPFVMKT FRMVCDPATD  120
ALICWGRGSN SFLVFDPLEF SHRVLPVYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEW  180
FLRGQVHLLR NIVRRKHSRA SSSASRVVEE MCGDEDQDIL VEISKLKEEQ RSIEMEIQDM  240
TRRLDATERR PQQMMAFLHR AVEDPEIVPR MMLEKDKHQQ QHSQQRRRVI SDSPDKKRRL  300
LFNATSSSSS SSMATTIKTE DEDDANLTTG SSPDQPGWCQ SPQLSSSSAW LNNPLGSIHP  360
AARAGGSGTP SAPGSAAYGG DKSSSDRYGG AFGCIQDDAD LGANDPTPPY PFSLFRGGF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.15e-80HSF family protein