PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0031s0012.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 627aa MW: 67743 Da PI: 4.9754

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0031s0012.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	7.1e-12	454	499	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er RR+++N++f Lr ++P+ K++Ka+ L A+ YI+ L Kaladp0031s0012.1.p 454 NHVEAERLRREKLNQKFYALRAVVPTV-----SKMDKASLLGDAISYINGL 499 799*********************6.....5*************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 627 aa Download sequence
MVNLWIDDAF QYDLSAFWPL PSSSSTTAHL DPPNPQLQNN PFTQESLHQR LLSLLDTTPT 60 QKWTYAIFWQ LSHSSTLGWG DGYYKGDDTK GQRRASDSTW LAEQDNRKKI LRELNSIISG 120 PGSVSLDDAV DEEVTDTEWF FLISMTQSFV NGDGLPGQAC LCSSPVWVVG EDLSSSSCER 180 ARQSRVFGIQ TMVCIPAVNG VVELGSTDLI FQSSDLMSRV RSLFHFEGFE SGNPWPVLSL 240 TGQDESGYDD QLAMLLTFSE PAQSLEMRDS GNGVGSSNHL APAPAAASSN VHVTDGNPSA 300 ASCVTENAGY KVDIPIGTPN LLEGQNFGSA GNADLLWVRP KSGENLSFGE ILKTSSSCGG 360 LVPDDDVAQF VASGGDGDKR RKSAASRQRK EEGVLSFTPS AGGPVLKPAV AVKCGEHYKG 420 SVKEADSSRV VEPEKKLPKK RGRKPANGRD EPINHVEAER LRREKLNQKF YALRAVVPTV 480 SKMDKASLLG DAISYINGLT AKLESLEADV QGLQGEVDSL KSVKMELSSP TGSNVSQEDG 540 GLKDLVLDVK IMGSDAMIRV QSSSKNHPAA ILMTALQQLS LDLQHASVSV VNNDLMIQQA 600 TIKMTSPCYT QEQLKLALSA RFRFSS*

Sequence ? help Back to Top

Protein Sequence Length: 627 aa Download sequence

MVNLWIDDAF QYDLSAFWPL PSSSSTTAHL DPPNPQLQNN PFTQESLHQR LLSLLDTTPT  60
QKWTYAIFWQ LSHSSTLGWG DGYYKGDDTK GQRRASDSTW LAEQDNRKKI LRELNSIISG  120
PGSVSLDDAV DEEVTDTEWF FLISMTQSFV NGDGLPGQAC LCSSPVWVVG EDLSSSSCER  180
ARQSRVFGIQ TMVCIPAVNG VVELGSTDLI FQSSDLMSRV RSLFHFEGFE SGNPWPVLSL  240
TGQDESGYDD QLAMLLTFSE PAQSLEMRDS GNGVGSSNHL APAPAAASSN VHVTDGNPSA  300
ASCVTENAGY KVDIPIGTPN LLEGQNFGSA GNADLLWVRP KSGENLSFGE ILKTSSSCGG  360
LVPDDDVAQF VASGGDGDKR RKSAASRQRK EEGVLSFTPS AGGPVLKPAV AVKCGEHYKG  420
SVKEADSSRV VEPEKKLPKK RGRKPANGRD EPINHVEAER LRREKLNQKF YALRAVVPTV  480
SKMDKASLLG DAISYINGLT AKLESLEADV QGLQGEVDSL KSVKMELSSP TGSNVSQEDG  540
GLKDLVLDVK IMGSDAMIRV QSSSKNHPAA ILMTALQQLS LDLQHASVSV VNNDLMIQQA  600
TIKMTSPCYT QEQLKLALSA RFRFSS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	1e-119	bHLH family protein