PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0031s0007.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 23987.3 Da PI: 11.2175 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.7 | 1.4e-13 | 30 | 79 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 ++++G+ ++ +gr +AeIrd ++ ++r++l +f++ e A +a++aa+++l+ Kaladp0031s0007.1.p 30 PKFRGIQKRP-WGRLAAEIRDpWK----KTRVWLDTFDSVEAATRAYDAAARSLR 79 79*****999.**********883....5**********************9986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence |
MGKVRGGATA AASLGNQVKD APLEIGSAEP KFRGIQKRPW GRLAAEIRDP WKKTRVWLDT 60 FDSVEAATRA YDAAARSLRC PKARTNFPTP PSSSIVFIFH RVAFEPSSSI VFMFGVVFES 120 SSSSSELSFN ISKFNSSSSS SRAELELKKK LSSRVRALRI KTHRVRAHVY INRAEFEYCD 180 TRLGSFAPLL PASDSQKKMQ IRRSRDAAFH NHSFA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G50640.1 | 4e-22 | ERF family protein |