PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0030s0005.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 292aa    MW: 32124.1 Da    PI: 4.9734
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0030s0005.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.49.6e-07162206655
                          HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                          +++ r+RR++i ++ +eL +l+P         +++ ae+ + A  Y+k+Lq
  Kaladp0030s0005.1.p 162 SIAARQRRRKIADKTQELGKLIPGgH------RMNTAEMFQSASMYVKYLQ 206
                          6788*******************955......9*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MGLSYLSNYS TADYVLQQSL ELPQDLLELV SFQDEFTLAD TSIDPLFHPL PQKQPNFVSR  60
PQLLTTQYDT PYLHSCKRRK QIPSQQTDAH FSYDSMLASG APFFDGSGSA EALHLAQEFQ  120
ADGQSWVDYV PFSPDVFASG TTTYDGPGGH MCGGGGGLSA QSIAARQRRR KIADKTQELG  180
KLIPGGHRMN TAEMFQSASM YVKYLQAQIA MLTLTNSIQE EAGSSECFER ERDIILQVLA  240
ASPVVQEKLY SQETCLVPRK LIQSLSSDSE LQSRKPPVIK QINSLLAAQA E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-24bHLH family protein