PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0028s0073.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 167aa MW: 19053.3 Da PI: 10.0992 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.4 | 5.1e-08 | 96 | 135 | 10 | 54 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P +K++ a++L +A++Y+ L Kaladp0028s0073.1.p 96 RQRRERISERMRILQRLVPGG-----TKMDTASMLDEAIHYVTFL 135 9******************87.....8**************9877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 167 aa Download sequence |
MDASMELLIM MQGDARLHRH IQNSAFDHHI PAPTKKFQNP IPEMPEYDKY NRMSAMREMI 60 FGIAALQPVE IDPEAVKPPR RKNVRISKDP QSVTARQRRE RISERMRILQ RLVPGGTKMD 120 TASMLDEAIH YVTFLKKQVQ RLETAVAGRV PPEMLEGQMM MGLGCV* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 96 | 101 | RQRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50330.1 | 3e-42 | bHLH family protein |