PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0028s0067.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 309aa    MW: 34256.2 Da    PI: 4.5513
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0028s0067.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1132.1e-35101012102
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                          Fl+k++++++d+++++++sw+ +g++fvv+++ efak++LpkyFkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fkkg+ 
  Kaladp0028s0067.1.p  10 FLTKTFQLIDDPSTNDVVSWNVDGSTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKTVPDK---------WEFANEHFKKGQA 90 
                          9***************************************************************9999.........************* PP

                          XXXXXXXXXXX CS
         HSF_DNA-bind  92 ellekikrkks 102
                          ell++i+r+k 
  Kaladp0028s0067.1.p  91 ELLTEIRRRKA 101
                          ********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAVRSAPAPF LTKTFQLIDD PSTNDVVSWN VDGSTFVVWK TAEFAKDLLP KYFKHNNFSS  60
FVRQLNTYGF RKTVPDKWEF ANEHFKKGQA ELLTEIRRRK AVVAAQAAGK PTGGSSPSNS  120
GEDLGSTSTS SPGSKNQACA DEIVMQFSGL SDENEKLKKD NEMLNSELAR AKKQCEELVS  180
FIARCMKVGV EEIDGIMKQQ GATVSSSSDP KTIVEISDDD DEEDEEFENE EVVGEEEEDD  240
EDKVDSLKLF GVWLKGEKET KNKRCRDEAV LSGNDKPIMD GGSSGSKKMK NVEFDAWWLK  300
MSTVPSKM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.19e-77HSF family protein