PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0028s0048.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

LBD

Protein Properties

Length: 347aa MW: 37947.3 Da PI: 5.6943

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0028s0048.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.6	1.8e-42	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +CaaCk++rrkC+++C++apyfp e+p+kf nvhk+FG snv+k+l++l++ +r+da++sl+yeAear+rdP+yG+vg+i+ lqq+l+q Kaladp0028s0048.1.p 6 PCAACKFQRRKCTPECIFAPYFPPEDPQKFVNVHKVFGGSNVSKILSDLNPAQRDDAARSLAYEAEARLRDPIYGCVGLISYLQQRLKQI 95 7*************************************************************************************** PP DUF260 91 kaelallkee 100 + ++ ++++e Kaladp0028s0048.1.p 96 QIDITEARKE 105 *9999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MSSNAPCAAC KFQRRKCTPE CIFAPYFPPE DPQKFVNVHK VFGGSNVSKI LSDLNPAQRD 60 DAARSLAYEA EARLRDPIYG CVGLISYLQQ RLKQIQIDIT EARKELATYV GPSAMLMTIP 120 QHGYGQMMYH PQQPQMMGNP SSSSSALPYT HLMGTPPVYG PGTSQQLVIR DQQQQQLMGG 180 GNPSSSASAL PYTSLIPSMM GAGSSSQPLL TREQSQLHGV DPQQYGAVAA TEQHELMRNY 240 ELQQQQQQDY LQYEPGGGPI HGSGFIQMAA DETGGGPSLA LGVNYDNPYN QIQQQHQHDI 300 VHQALQAQLA LQSQLQHAEH VLQTPLDQQP QNKAESDEDR SADPSS*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MSSNAPCAAC KFQRRKCTPE CIFAPYFPPE DPQKFVNVHK VFGGSNVSKI LSDLNPAQRD  60
DAARSLAYEA EARLRDPIYG CVGLISYLQQ RLKQIQIDIT EARKELATYV GPSAMLMTIP  120
QHGYGQMMYH PQQPQMMGNP SSSSSALPYT HLMGTPPVYG PGTSQQLVIR DQQQQQLMGG  180
GNPSSSASAL PYTSLIPSMM GAGSSSQPLL TREQSQLHGV DPQQYGAVAA TEQHELMRNY  240
ELQQQQQQDY LQYEPGGGPI HGSGFIQMAA DETGGGPSLA LGVNYDNPYN QIQQQHQHDI  300
VHQALQAQLA LQSQLQHAEH VLQTPLDQQP QNKAESDEDR SADPSS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-57	LBD family protein