PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0026s0146.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | LBD | ||||||||
Protein Properties | Length: 157aa MW: 17378 Da PI: 7.8276 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 112.6 | 2.7e-35 | 1 | 90 | 2 | 91 |
DUF260 2 CaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 CaaCk lrrkC++dC+lapyfp+ +p++fa vh +FGa+n+ k+l+++p + r +a++++++eA +r+ dPvyG++g+i+klqqq++q++ Kaladp0026s0146.1.p 1 CAACKCLRRKCPADCILAPYFPSWNPQRFAPVHNVFGAANMAKMLEQVPAHLRGQAADCMIFEAAMRMIDPVYGSAGIISKLQQQIKQMQ 90 ***************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
CAACKCLRRK CPADCILAPY FPSWNPQRFA PVHNVFGAAN MAKMLEQVPA HLRGQAADCM 60 IFEAAMRMID PVYGSAGIIS KLQQQIKQMQ IMKIQGEVAL HQAQTILHLQ QLGDKSNTDP 120 GASRRADADS NNGQHYELDL DEFYVNFISS LNPKPF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 2e-32 | LBD family protein |