PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0026s0063.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27817 Da PI: 8.6789 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s Kaladp0026s0063.1.p 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 83.2 | 5.9e-28 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ es+++e+ kLk + e Lq +qR+llGedL++Ls keL+qLe+qLe+ lk iRs++++ +l+++ elq+ke +l e ++ L++kl Kaladp0026s0063.1.p 82 RPNKELESSYREYLKLKGKFEALQLTQRNLLGEDLGPLSTKELEQLEHQLESTLKLIRSTRTQCMLDKLAELQNKESALLESKRILEMKL 171 4678899**********************************************************************************9 PP K-box 99 ee 100 ee Kaladp0026s0063.1.p 172 EE 173 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST 60 NNMMKTLERY QKCSYGAVEV NRPNKELESS YREYLKLKGK FEALQLTQRN LLGEDLGPLS 120 TKELEQLEHQ LESTLKLIRS TRTQCMLDKL AELQNKESAL LESKRILEMK LEEMVPKNSF 180 RLSWEAGEQS MPYHQAQSHA LYQQLDCNPT LQIGYDQVAA DQMNATTSTH QVSGFIPGWM 240 L* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 1e-117 | MIKC_MADS family protein |