PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0998.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 286aa    MW: 31355.9 Da    PI: 7.9813
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0998.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-10857154
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                         r++ +  rE+ RRdr+N+ f++L + l ++     +K++K +iL+ A++ +k+L
  Kaladp0024s0998.1.p  8 RKVQKADREKLRRDRLNEQFAQLGSALDPD----RPKNDKGTILTDAIQLLKDL 57
                         5677889********************997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MENSAAARKV QKADREKLRR DRLNEQFAQL GSALDPDRPK NDKGTILTDA IQLLKDLTAQ  60
VDKLKADYNE LTEESRELTQ EKNDLREEKA SLKSDIENLS LQYQQRMRAS FPWGAMDHSV  120
VMAPPPYPYP VPVPVPPGAM PIHPSMQPYP FFGNQNPGAV PNSFSAFMPH MATNAPTDQQ  180
HSGQCAAPVV QPAAKSHVSN RQDGKHKSPK DVRDERSEDS NDVATELELK TPGSKSDQGS  240
VSMPRKSKKQ SRKESSIPGE SCSSRCSSRQ DSSTNSVACG AKPDS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-79bHLH family protein