PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0935.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 256aa    MW: 27404.6 Da    PI: 8.1374
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0935.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.84e-20128162135
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                          C+nC tt+TplWR+gp g+k+LCnaCG++y+k+++
  Kaladp0024s0935.1.p 128 CANCDTTSTPLWRNGPKGPKSLCNACGIRYKKEER 162
                          ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MMHNNMSSYY SQSNGNQQSC YDYDYYCAAD PYGYSGFNAA TSSSTSSNVD CTLSLGTPST  60
RSDAGGEQTK KQSGRRSGNR VSNFCWDLLQ QTTLSSSKHS AAGTNSYSKG GRASGGGGGG  120
DPLVARRCAN CDTTSTPLWR NGPKGPKSLC NACGIRYKKE ERRASAAASA TSHGSGASAM  180
ESQYASSEHY YSNQSYTHHQ TQRMNCLFPA AANEYRYTDA DDGGSYEHSG NGGVSFLPWM  240
LNVADRPSLV HDFTR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110118GGRASGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.11e-46GATA family protein