PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0849.4.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 1091aa    MW: 120271 Da    PI: 6.5056
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0849.4.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.61e-22139240199
                          EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                          f+k+lt sd++++g +++p++ ae++       + +++  ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F 
  Kaladp0024s0849.4.p 139 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLTGDSVLFI 226
                          99*****************************954.4444.48************************************************ PP

                          E-SSSEE..EEEEE-S CS
                   B3  84 ldgrsefelvvkvfrk 99 
                            ++++++l+++ +r+
  Kaladp0024s0849.4.p 227 --RDEKQQLLLGTRRA 240
                          ..55788889999886 PP
2Auxin_resp116.62.1e-38265348183
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                          aa+aa+++s+F+v+YnPr+s+seFv++++k+ ka++  ++s+GmRf+m fete+s +rr++Gt++g+sd+dpv+W+nS+Wr+L+
  Kaladp0024s0849.4.p 265 AANAAANNSIFTVFYNPRTSPSEFVIPLAKYYKAVNsYQISLGMRFRMTFETEESGTRRYMGTITGISDVDPVNWKNSQWRNLQ 348
                          799********************************989********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1091 aa     Download sequence    
MSATMAPASA VADAETPPAE AVVRCQDANK TINPELWQAC AGPLVNLPMA GTHVVYFPQG  60
HSEQVAVSMK KDVDAQYPNY SNLPPKLICL LHSVTLLANP DTDEVYAQMV LQPVSSIDQE  120
ALIGSDHSLK SHKPQTEFFC KTLTASDTST HGGFSVPRRA AEKIFPPLDF SMQPPAQEIV  180
AKDLHDNVWT FRHIYRGQPK RHLLTTGWSL FVSGKRLLTG DSVLFIRDEK QQLLLGTRRA  240
NRLPPNVSSS VISSDSMHIG ILAAAANAAA NNSIFTVFYN PRTSPSEFVI PLAKYYKAVN  300
SYQISLGMRF RMTFETEESG TRRYMGTITG ISDVDPVNWK NSQWRNLQVG WDEENTGEKC  360
HRVSIWDIEP VTAPYFICPP PFIRFKRPRQ IGMPDEESSD MENLFKRVMP WLHDNAFLKE  420
SRPIPGINFT QWMNMQQNHL LTHSLQSAYM PSIPGCVLPS LAEADPSQHV GLSASHYPPQ  480
SNPQLGIQWP QQQLHQLPKP SPLNPCSTSH QHLPDLTQQS QNSVSQLPAS SHYMLPQTQV  540
KITDILQKQL ASQNAQAQGS IPQISNQQQL LSTSHNLGQL PEIVNQPVTN NLIQLPMLQR  600
GHQQEQQYLH SQQSITQHVG QIASFQGQQR PTADVANNIY IPASIGSVQA VEMPQVMTSS  660
TYPCTMDPTQ QQCGNNTGLS TGCISSSPQQ LRSVHQPLAV NISELPFPTG CHTSNVNQVS  720
VDGTTIWTGA GQLLCANGVP SCSTSTLNEK FPNAIKSVKG MIQKSYIQGP EDMTPPAFIL  780
PVTGAIESAS SSNSFVRCSE NKSAVLTELC NGKKQNAGVA NNFMIVNSVQ PQKNYLDTSY  840
SSTSVSQFEN NASLQQNVNP ASFSFQPMMS QTAVGFVDHR NNISFEMSSG QNITSLNQDP  900
LLSQDIVSLG KNKSASEDML HDFEYAKDPQ QELSSSIVSQ SFGVPDMTFN SIESTLSDNS  960
FIAKPPFAPP PQPYQRLRTY TKVYKRGAVG RSIDITAYSG YDDLKQDLAR RFGIEGQLED  1020
RHKVRWKLVY VDHENDVLLV GDDPWEEFVS CVRSIKILSP QEVQQMSLDG DVSNSVLLKQ  1080
ACSSSNGGIG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20730.20.0ARF family protein