PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0849.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 1104aa MW: 121681 Da PI: 6.4788

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0849.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.6	1e-22	152	253	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F Kaladp0024s0849.3.p 152 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLTGDSVLFI 239 99***************************954.4444.48********************************************** PP E-SSSEE..EEEEE-S CS B3 84 ldgrsefelvvkvfrk 99 ++++++l+++ +r+ Kaladp0024s0849.3.p 240 --RDEKQQLLLGTRRA 253 ..55788889999886 PP
2	Auxin_resp	116.6	2.1e-38	278	361	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aa+aa+++s+F+v+YnPr+s+seFv++++k+ ka++ ++s+GmRf+m fete+s +rr++Gt++g+sd+dpv+W+nS+Wr+L+ Kaladp0024s0849.3.p 278 AANAAANNSIFTVFYNPRTSPSEFVIPLAKYYKAVNsYQISLGMRFRMTFETEESGTRRYMGTITGISDVDPVNWKNSQWRNLQ 361 799******************************989******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1104 aa Download sequence
MSATMAPASA VADAETPPAE AVVRCQVCHG NLLLEVMSLD ANKTINPELW QACAGPLVNL 60 PMAGTHVVYF PQGHSEQVAV SMKKDVDAQY PNYSNLPPKL ICLLHSVTLL ANPDTDEVYA 120 QMVLQPVSSI DQEALIGSDH SLKSHKPQTE FFCKTLTASD TSTHGGFSVP RRAAEKIFPP 180 LDFSMQPPAQ EIVAKDLHDN VWTFRHIYRG QPKRHLLTTG WSLFVSGKRL LTGDSVLFIR 240 DEKQQLLLGT RRANRLPPNV SSSVISSDSM HIGILAAAAN AAANNSIFTV FYNPRTSPSE 300 FVIPLAKYYK AVNSYQISLG MRFRMTFETE ESGTRRYMGT ITGISDVDPV NWKNSQWRNL 360 QVGWDEENTG EKCHRVSIWD IEPVTAPYFI CPPPFIRFKR PRQIGMPDEE SSDMENLFKR 420 VMPWLHDNAF LKESRPIPGI NFTQWMNMQQ NHLLTHSLQS AYMPSIPGCV LPSLAEADPS 480 QHVGLSASHY PPQSNPQLGI QWPQQQLHQL PKPSPLNPCS TSHQHLPDLT QQSQNSVSQL 540 PASSHYMLPQ TQVKITDILQ KQLASQNAQA QGSIPQISNQ QQLLSTSHNL GQLPEIVNQP 600 VTNNLIQLPM LQRGHQQEQQ YLHSQQSITQ HVGQIASFQG QQRPTADVAN NIYIPASIGS 660 VQAVEMPQVM TSSTYPCTMD PTQQQCGNNT GLSTGCISSS PQQLRSVHQP LAVNISELPF 720 PTGCHTSNVN QVSVDGTTIW TGAGQLLCAN GVPSCSTSTL NEKFPNAIKS VKGMIQKSYI 780 QGPEDMTPPA FILPVTGAIE SASSSNSFVR CSENKSAVLT ELCNGKKQNA GVANNFMIVN 840 SVQPQKNYLD TSYSSTSVSQ FENNASLQQN VNPASFSFQP MMSQTAVGFV DHRNNISFEM 900 SSGQNITSLN QDPLLSQDIV SLGKNKSASE DMLHDFEYAK DPQQELSSSI VSQSFGVPDM 960 TFNSIESTLS DNSFIAKPPF APPPQPYQRL RTYTKVYKRG AVGRSIDITA YSGYDDLKQD 1020 LARRFGIEGQ LEDRHKVRWK LVYVDHENDV LLVGDDPWEE FVSCVRSIKI LSPQEVQQMS 1080 LDGDVSNSVL LKQACSSSNG GIG*

Sequence ? help Back to Top

Protein Sequence Length: 1104 aa Download sequence

MSATMAPASA VADAETPPAE AVVRCQVCHG NLLLEVMSLD ANKTINPELW QACAGPLVNL  60
PMAGTHVVYF PQGHSEQVAV SMKKDVDAQY PNYSNLPPKL ICLLHSVTLL ANPDTDEVYA  120
QMVLQPVSSI DQEALIGSDH SLKSHKPQTE FFCKTLTASD TSTHGGFSVP RRAAEKIFPP  180
LDFSMQPPAQ EIVAKDLHDN VWTFRHIYRG QPKRHLLTTG WSLFVSGKRL LTGDSVLFIR  240
DEKQQLLLGT RRANRLPPNV SSSVISSDSM HIGILAAAAN AAANNSIFTV FYNPRTSPSE  300
FVIPLAKYYK AVNSYQISLG MRFRMTFETE ESGTRRYMGT ITGISDVDPV NWKNSQWRNL  360
QVGWDEENTG EKCHRVSIWD IEPVTAPYFI CPPPFIRFKR PRQIGMPDEE SSDMENLFKR  420
VMPWLHDNAF LKESRPIPGI NFTQWMNMQQ NHLLTHSLQS AYMPSIPGCV LPSLAEADPS  480
QHVGLSASHY PPQSNPQLGI QWPQQQLHQL PKPSPLNPCS TSHQHLPDLT QQSQNSVSQL  540
PASSHYMLPQ TQVKITDILQ KQLASQNAQA QGSIPQISNQ QQLLSTSHNL GQLPEIVNQP  600
VTNNLIQLPM LQRGHQQEQQ YLHSQQSITQ HVGQIASFQG QQRPTADVAN NIYIPASIGS  660
VQAVEMPQVM TSSTYPCTMD PTQQQCGNNT GLSTGCISSS PQQLRSVHQP LAVNISELPF  720
PTGCHTSNVN QVSVDGTTIW TGAGQLLCAN GVPSCSTSTL NEKFPNAIKS VKGMIQKSYI  780
QGPEDMTPPA FILPVTGAIE SASSSNSFVR CSENKSAVLT ELCNGKKQNA GVANNFMIVN  840
SVQPQKNYLD TSYSSTSVSQ FENNASLQQN VNPASFSFQP MMSQTAVGFV DHRNNISFEM  900
SSGQNITSLN QDPLLSQDIV SLGKNKSASE DMLHDFEYAK DPQQELSSSI VSQSFGVPDM  960
TFNSIESTLS DNSFIAKPPF APPPQPYQRL RTYTKVYKRG AVGRSIDITA YSGYDDLKQD  1020
LARRFGIEGQ LEDRHKVRWK LVYVDHENDV LLVGDDPWEE FVSCVRSIKI LSPQEVQQMS  1080
LDGDVSNSVL LKQACSSSNG GIG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20730.2	0.0	ARF family protein