PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0849.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 1115aa MW: 123417 Da PI: 6.6808

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0849.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.6	1e-22	163	264	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F Kaladp0024s0849.1.p 163 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLTGDSVLFI 250 99***************************954.4444.48********************************************** PP E-SSSEE..EEEEE-S CS B3 84 ldgrsefelvvkvfrk 99 ++++++l+++ +r+ Kaladp0024s0849.1.p 251 --RDEKQQLLLGTRRA 264 ..55788889999886 PP
2	Auxin_resp	116.6	2.2e-38	289	372	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aa+aa+++s+F+v+YnPr+s+seFv++++k+ ka++ ++s+GmRf+m fete+s +rr++Gt++g+sd+dpv+W+nS+Wr+L+ Kaladp0024s0849.1.p 289 AANAAANNSIFTVFYNPRTSPSEFVIPLAKYYKAVNsYQISLGMRFRMTFETEESGTRRYMGTITGISDVDPVNWKNSQWRNLQ 372 799******************************989******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1115 aa Download sequence
MQPKSLHSDA ACLLLLVYVT RSFLLASYTK YEWLIHVVCH GNLLLEVMSL DANKTINPEL 60 WQACAGPLVN LPMAGTHVVY FPQGHSEQVA VSMKKDVDAQ YPNYSNLPPK LICLLHSVTL 120 LANPDTDEVY AQMVLQPVSS IDQEALIGSD HSLKSHKPQT EFFCKTLTAS DTSTHGGFSV 180 PRRAAEKIFP PLDFSMQPPA QEIVAKDLHD NVWTFRHIYR GQPKRHLLTT GWSLFVSGKR 240 LLTGDSVLFI RDEKQQLLLG TRRANRLPPN VSSSVISSDS MHIGILAAAA NAAANNSIFT 300 VFYNPRTSPS EFVIPLAKYY KAVNSYQISL GMRFRMTFET EESGTRRYMG TITGISDVDP 360 VNWKNSQWRN LQVGWDEENT GEKCHRVSIW DIEPVTAPYF ICPPPFIRFK RPRQIGMPDE 420 ESSDMENLFK RVMPWLHDNA FLKESRPIPG INFTQWMNMQ QNHLLTHSLQ SAYMPSIPGC 480 VLPSLAEADP SQHVGLSASH YPPQSNPQLG IQWPQQQLHQ LPKPSPLNPC STSHQHLPDL 540 TQQSQNSVSQ LPASSHYMLP QTQVKITDIL QKQLASQNAQ AQGSIPQISN QQQLLSTSHN 600 LGQLPEIVNQ PVTNNLIQLP MLQRGHQQEQ QYLHSQQSIT QHVGQIASFQ GQQRPTADVA 660 NNIYIPASIG SVQAVEMPQV MTSSTYPCTM DPTQQQCGNN TGLSTGCISS SPQQLRSVHQ 720 PLAVNISELP FPTGCHTSNV NQVSVDGTTI WTGAGQLLCA NGVPSCSTST LNEKFPNAIK 780 SVKGMIQKSY IQGPEDMTPP AFILPVTGAI ESASSSNSFV RCSENKSAVL TELCNGKKQN 840 AGVANNFMIV NSVQPQKNYL DTSYSSTSVS QFENNASLQQ NVNPASFSFQ PMMSQTAVGF 900 VDHRNNISFE MSSGQNITSL NQDPLLSQDI VSLGKNKSAS EDMLHDFEYA KDPQQELSSS 960 IVSQSFGVPD MTFNSIESTL SDNSFIAKPP FAPPPQPYQR LRTYTKVYKR GAVGRSIDIT 1020 AYSGYDDLKQ DLARRFGIEG QLEDRHKVRW KLVYVDHEND VLLVGDDPWE EFVSCVRSIK 1080 ILSPQEVQQM SLDGDVSNSV LLKQACSSSN GGIG*

Sequence ? help Back to Top

Protein Sequence Length: 1115 aa Download sequence

MQPKSLHSDA ACLLLLVYVT RSFLLASYTK YEWLIHVVCH GNLLLEVMSL DANKTINPEL  60
WQACAGPLVN LPMAGTHVVY FPQGHSEQVA VSMKKDVDAQ YPNYSNLPPK LICLLHSVTL  120
LANPDTDEVY AQMVLQPVSS IDQEALIGSD HSLKSHKPQT EFFCKTLTAS DTSTHGGFSV  180
PRRAAEKIFP PLDFSMQPPA QEIVAKDLHD NVWTFRHIYR GQPKRHLLTT GWSLFVSGKR  240
LLTGDSVLFI RDEKQQLLLG TRRANRLPPN VSSSVISSDS MHIGILAAAA NAAANNSIFT  300
VFYNPRTSPS EFVIPLAKYY KAVNSYQISL GMRFRMTFET EESGTRRYMG TITGISDVDP  360
VNWKNSQWRN LQVGWDEENT GEKCHRVSIW DIEPVTAPYF ICPPPFIRFK RPRQIGMPDE  420
ESSDMENLFK RVMPWLHDNA FLKESRPIPG INFTQWMNMQ QNHLLTHSLQ SAYMPSIPGC  480
VLPSLAEADP SQHVGLSASH YPPQSNPQLG IQWPQQQLHQ LPKPSPLNPC STSHQHLPDL  540
TQQSQNSVSQ LPASSHYMLP QTQVKITDIL QKQLASQNAQ AQGSIPQISN QQQLLSTSHN  600
LGQLPEIVNQ PVTNNLIQLP MLQRGHQQEQ QYLHSQQSIT QHVGQIASFQ GQQRPTADVA  660
NNIYIPASIG SVQAVEMPQV MTSSTYPCTM DPTQQQCGNN TGLSTGCISS SPQQLRSVHQ  720
PLAVNISELP FPTGCHTSNV NQVSVDGTTI WTGAGQLLCA NGVPSCSTST LNEKFPNAIK  780
SVKGMIQKSY IQGPEDMTPP AFILPVTGAI ESASSSNSFV RCSENKSAVL TELCNGKKQN  840
AGVANNFMIV NSVQPQKNYL DTSYSSTSVS QFENNASLQQ NVNPASFSFQ PMMSQTAVGF  900
VDHRNNISFE MSSGQNITSL NQDPLLSQDI VSLGKNKSAS EDMLHDFEYA KDPQQELSSS  960
IVSQSFGVPD MTFNSIESTL SDNSFIAKPP FAPPPQPYQR LRTYTKVYKR GAVGRSIDIT  1020
AYSGYDDLKQ DLARRFGIEG QLEDRHKVRW KLVYVDHEND VLLVGDDPWE EFVSCVRSIK  1080
ILSPQEVQQM SLDGDVSNSV LLKQACSSSN GGIG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20730.2	0.0	ARF family protein