PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0815.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | LBD | ||||||||
Protein Properties | Length: 214aa MW: 23090.6 Da PI: 7.3573 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 143.9 | 4.9e-45 | 11 | 110 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++r+da++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql Kaladp0024s0815.1.p 11 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHTSQRDDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQL 100 7***************************************************************************************** PP DUF260 91 kaelallkee 100 + +la +k+e Kaladp0024s0815.1.p 101 QLDLACAKSE 110 *****99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MASASALTTS PCAACKFLRR KCQPECVFAP YFPPDQPQKF ANVHKVFGAS NVTKLLNELH 60 TSQRDDAVNS LAYEADMRLR DPVYGCVGVI SLLQHQLRQL QLDLACAKSE LSKYKTAISG 120 AAAAQRSGVI QGGGAHGGHG QHHHYLGGHG QYHHQYQVVR SESSFDSGND NSNEDEFDAG 180 GFLDMLSQFQ QSAGRGGPGG EHDRRTTAAV DRF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65620.3 | 4e-65 | LBD family protein |