PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0676.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 273aa    MW: 30811.8 Da    PI: 7.7687
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0676.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA42.68.5e-1492125135
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                          C++C+tt+ p+WR+ p+g + +C  CGl+ rk+g+
  Kaladp0024s0676.3.p  92 CAHCNTTQAPMWRKTPSGAR-ICDFCGLRLRKRGM 125
                          ********************.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MVEVVLATCQ LQHRLRSKGT ASSSQDSASG NNERARSSEK MKRGKFTSPK TSDAPAPVRP  60
PANIESVEEG YLERPRKFRS MIDILSQNGQ SCAHCNTTQA PMWRKTPSGA RICDFCGLRL  120
RKRGMQLSPQ KKDQTITGSV QEADNKDEEV TDDLKFLLGN DRLQVEQTMK KYADEISASL  180
GLLEQQLEGF LDNVTSKCRS MTFFEKQSLW SLIKDLPPEN FDRVVEIIKR SRGLDQRDEN  240
DILVDLEDTD NAVLWRLYYY AKAVENARNL VG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G45170.11e-07GATA family protein