PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0676.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GATA | ||||||||
Protein Properties | Length: 382aa MW: 42462.8 Da PI: 5.4136 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 41.9 | 1.4e-13 | 201 | 234 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C+tt+ p+WR+ p+g + +C CGl+ rk+g+ Kaladp0024s0676.2.p 201 CAHCNTTQAPMWRKTPSGAR-ICDFCGLRLRKRGM 234 ********************.***********996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
MSVSPSSDGP KKEVPDYIGF FTHELEDLMS GADVAGDDFF PLLGFKSDAA GRQMRGDDAN 60 ESREGGGGLK KSGSLFCDGL GGELSNYKKE KLKGLLKQSV SIFTQEVDQM VEVVLATCQL 120 QHRLRSKGTA SSSQDSASGN NERARSSEKM KRGKFTSPKT SDAPAPVRPP ANIESVEEGY 180 LERPRKFRSM IDILSQNGQS CAHCNTTQAP MWRKTPSGAR ICDFCGLRLR KRGMQLSPQK 240 KDQTITGSVQ EADNKDEEVT DDLKFLLGND RLQVEQTMKK YADEISASLG LLEQQLEGFL 300 DNVTSKCRSM TFFEKQSLWS LIKDLPPENF DRVVEIIKRS RGLDQRDEND ILVDLEDTDN 360 AVLWRLYYYA KAVENARNLV G* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45170.1 | 2e-07 | GATA family protein |