PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0676.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 412aa    MW: 45857.6 Da    PI: 5.2648
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0676.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA41.81.5e-13201234135
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                          C++C+tt+ p+WR+ p+g + +C  CGl+ rk+g+
  Kaladp0024s0676.1.p 201 CAHCNTTQAPMWRKTPSGAR-ICDFCGLRLRKRGM 234
                          ********************.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MSVSPSSDGP KKEVPDYIGF FTHELEDLMS GADVAGDDFF PLLGFKSDAA GRQMRGDDAN  60
ESREGGGGLK KSGSLFCDGL GGELSNYKKE KLKGLLKQSV SIFTQEVDQM VEVVLATCQL  120
QHRLRSKGTA SSSQDSASGN NERARSSEKM KRGKFTSPKT SDAPAPVRPP ANIESVEEGY  180
LERPRKFRSM IDILSQNGQS CAHCNTTQAP MWRKTPSGAR ICDFCGLRLR KRGMQLSPQK  240
KDQTITGSVQ EADNKDEEVT DDLKFLLGND RLQVEQTMKK YADEISASLG LLEQQLEGFL  300
DNVTSKCRSM TFFEKQSLWS LIKDLPPENF DRVVEIIKRS RGLDQRDEND ILVDLEDTVN  360
NLSINSLENQ SVYPLNESLI HLLFVTLQDN AVLWRLYYYA KAVENARNLV G*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G45170.12e-07GATA family protein