PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0397.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 199aa MW: 22580.1 Da PI: 7.216 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83 | 1.9e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtf+kRr+gilKKA+ELSvLCdae+ v ifs +gkl+ey+s Kaladp0024s0397.1.p 9 KRIENPVHRQVTFCKRRAGILKKAKELSVLCDAEIGVFIFSAHGKLFEYAS 59 79***********************************************86 PP | |||||||
2 | K-box | 60.8 | 5.3e-21 | 91 | 176 | 15 | 100 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +e++ Lkkeie+Lq+ R + G + +++++ eL+ e++Le + +iRs+K+e ++++ie+l++ke l+ +n L++k+ e Kaladp0024s0397.1.p 91 KDAIEEINMLKKEIESLQQVMRFMFGGGTGTMNVDELHVQEKHLEALIYHIRSTKMEAMFQEIETLKNKEGVLKAANSFLQQKMHE 176 455689****************************************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MARGKVQMKR IENPVHRQVT FCKRRAGILK KAKELSVLCD AEIGVFIFSA HGKLFEYASK 60 GDMQGLIDRY TKSTTGETPL HQETEYSAFQ KDAIEEINML KKEIESLQQV MRFMFGGGTG 120 TMNVDELHVQ EKHLEALIYH IRSTKMEAMF QEIETLKNKE GVLKAANSFL QQKMHERVEE 180 MAADDFAALA ASVQFPIF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 5e-59 | MIKC_MADS family protein |