PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0248.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 267aa    MW: 29388.6 Da    PI: 6.3117
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0248.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.7e-111401255
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         RR++iN++f++Lr+l+P +     +K + a+ L ++++Y+++Lq
  Kaladp0024s0248.1.p  1 RRSKINERFQRLRDLIPIS----EQKRDTASFLLEVIDYVQYLQ 40
                         9*****************8....79******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
RRSKINERFQ RLRDLIPISE QKRDTASFLL EVIDYVQYLQ GEVQKYEGPY QPWSAEPTKL  60
MPWRNNHWRT QSIAPQPLGN GVEAGYAPKF NDASQTPLLG HPHEFNESDA LSDPSGRAMD  120
QHPDLASSAM AMQTLAHHSQ NDRLLSHQLQ RPLSDAQSAD PSLAAGTFSQ PDGLMIEAGT  180
ISISSAYSQG LLNTLTDALQ RAGVDLSQAN ISVRIDLGKR ANRGPAALED YSNLPSTHPP  240
PSSSGGEDLE QAQKRLKTQR SREVQN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-66bHLH family protein