PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0023s0090.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 357aa MW: 39641.8 Da PI: 4.5176

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0023s0090.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.4	4e-11	183	226	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++P + K++ +iL +++Y+k+L Kaladp0023s0090.1.p 183 LMAERRRRKRLNDRLSMLRSIVPRiS------KMDRTSILADTIDYMKEL 226 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MELSQSFLLE ELLGLRRENC STYQTGVAMD EFYTDGWSCD FIDESQVLAA SADAGMATAA 60 GFAMPQMEPY FDLPFSEVYN SLDASFTAPV TTVADQFSLA YEINNGTTLL PPIHDQYTSM 120 VDEEFTFLSN GVQHVGEDKY ASGCKVEMVL SPGENLGSYK SLGGGKERRN GVKKVGGQPS 180 KNLMAERRRR KRLNDRLSML RSIVPRISKM DRTSILADTI DYMKELLEKV SKLEEEEKEH 240 TEAGPINKLK ELKSSEGQAK NSPKFDVKMG EKDTRIDICC STRPGLLIST VNTLETLGLE 300 IQQCVISCFN DFSMQAACSQ VAEEPMELTT EEIKQALFRN AGYEGRCLKE SSQEMS*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MELSQSFLLE ELLGLRRENC STYQTGVAMD EFYTDGWSCD FIDESQVLAA SADAGMATAA  60
GFAMPQMEPY FDLPFSEVYN SLDASFTAPV TTVADQFSLA YEINNGTTLL PPIHDQYTSM  120
VDEEFTFLSN GVQHVGEDKY ASGCKVEMVL SPGENLGSYK SLGGGKERRN GVKKVGGQPS  180
KNLMAERRRR KRLNDRLSML RSIVPRISKM DRTSILADTI DYMKELLEKV SKLEEEEKEH  240
TEAGPINKLK ELKSSEGQAK NSPKFDVKMG EKDTRIDICC STRPGLLIST VNTLETLGLE  300
IQQCVISCFN DFSMQAACSQ VAEEPMELTT EEIKQALFRN AGYEGRCLKE SSQEMS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	193	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	2e-67	bHLH family protein