PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0023s0071.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GRF

Protein Properties

Length: 446aa MW: 48175.9 Da PI: 8.9115

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0023s0071.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	73.1	3.1e-23	82	126	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC ++++ g+k+CE+Hl+rgr+rsrk++e Kaladp0023s0071.2.p 82 DPEPGRCRRTDGKKWRCAKDAVHGHKYCEKHLNRGRHRSRKPVEG 126 79****************************************986 PP
2	QLQ	51.7	2.7e-18	11	46	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT +Q+ +L++Q+l+yKy+aan+ vP++L+ +i+k Kaladp0023s0071.2.p 11 LFTQNQWFELEQQALIYKYIAANVSVPSNLIIPIKK 46 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MHAPFAGARQ LFTQNQWFEL EQQALIYKYI AANVSVPSNL IIPIKKSFNP WGLPGSISPN 60 GSLSSSSFGW GPFHLGFHGS TDPEPGRCRR TDGKKWRCAK DAVHGHKYCE KHLNRGRHRS 120 RKPVEGQKPD QSVAGAANFA NKVAPMASSL SKASVMPGGR SANGLAAKGA HSTLNPFTDL 180 ITKRTQDLQG ISMLSPAISL GSKDASFAIP KPKDPFEESY QSEFGFVSSD YLQNPYQKIS 240 SCLNSSFVDF SDQDSRDQHP LRQFMEDWPK ERSEHSSLTW QDETKPDWTK LSMAIPVVSS 300 GLSSSASSPT HERLALSPLR LGLEFHQNEM GANEFGEPFP KDPAYMPWGS SAGGPLGEVL 360 KISSSKRPHI ENPSGLNLMT KGWDGAKAQF EPSPTGVLLK SAFGSLSNSS AGSSPRGESR 420 MTSEAGSLCN DAPGSTTLVS SLPFS*

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MHAPFAGARQ LFTQNQWFEL EQQALIYKYI AANVSVPSNL IIPIKKSFNP WGLPGSISPN  60
GSLSSSSFGW GPFHLGFHGS TDPEPGRCRR TDGKKWRCAK DAVHGHKYCE KHLNRGRHRS  120
RKPVEGQKPD QSVAGAANFA NKVAPMASSL SKASVMPGGR SANGLAAKGA HSTLNPFTDL  180
ITKRTQDLQG ISMLSPAISL GSKDASFAIP KPKDPFEESY QSEFGFVSSD YLQNPYQKIS  240
SCLNSSFVDF SDQDSRDQHP LRQFMEDWPK ERSEHSSLTW QDETKPDWTK LSMAIPVVSS  300
GLSSSASSPT HERLALSPLR LGLEFHQNEM GANEFGEPFP KDPAYMPWGS SAGGPLGEVL  360
KISSSKRPHI ENPSGLNLMT KGWDGAKAQF EPSPTGVLLK SAFGSLSNSS AGSSPRGESR  420
MTSEAGSLCN DAPGSTTLVS SLPFS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	6e-64	GRF family protein