PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0023s0071.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GRF

Protein Properties

Length: 581aa MW: 61695.9 Da PI: 8.0861

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0023s0071.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.6	4.3e-23	217	261	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC ++++ g+k+CE+Hl+rgr+rsrk++e Kaladp0023s0071.1.p 217 DPEPGRCRRTDGKKWRCAKDAVHGHKYCEKHLNRGRHRSRKPVEG 261 79****************************************985 PP
2	QLQ	51.2	3.7e-18	146	181	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT +Q+ +L++Q+l+yKy+aan+ vP++L+ +i+k Kaladp0023s0071.1.p 146 LFTQNQWFELEQQALIYKYIAANVSVPSNLIIPIKK 181 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MLYGGAVEAA AAAGVMDFGT KPKSDRPESA KRERSEDGQV GGGGGGQRRA KAAGKGGVDA 60 MLLMSSSAGG VVEGQLGSGS LVFEDERNML SFSSPGGAED EKMGQNAALQ LCYPQSVCSR 120 TSGDFGLAGS LTSPNMHAPF AGARQLFTQN QWFELEQQAL IYKYIAANVS VPSNLIIPIK 180 KSFNPWGLPG SISPNGSLSS SSFGWGPFHL GFHGSTDPEP GRCRRTDGKK WRCAKDAVHG 240 HKYCEKHLNR GRHRSRKPVE GQKPDQSVAG AANFANKVAP MASSLSKASV MPGGRSANGL 300 AAKGAHSTLN PFTDLITKRT QDLQGISMLS PAISLGSKDA SFAIPKPKDP FEESYQSEFG 360 FVSSDYLQNP YQKISSCLNS SFVDFSDQDS RDQHPLRQFM EDWPKERSEH SSLTWQDETK 420 PDWTKLSMAI PVVSSGLSSS ASSPTHERLA LSPLRLGLEF HQNEMGANEF GEPFPKDPAY 480 MPWGSSAGGP LGEVLKISSS KRPHIENPSG LNLMTKGWDG AKAQFEPSPT GVLLKSAFGS 540 LSNSSAGSSP RGESRMTSEA GSLCNDAPGS TTLVSSLPFS *

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MLYGGAVEAA AAAGVMDFGT KPKSDRPESA KRERSEDGQV GGGGGGQRRA KAAGKGGVDA  60
MLLMSSSAGG VVEGQLGSGS LVFEDERNML SFSSPGGAED EKMGQNAALQ LCYPQSVCSR  120
TSGDFGLAGS LTSPNMHAPF AGARQLFTQN QWFELEQQAL IYKYIAANVS VPSNLIIPIK  180
KSFNPWGLPG SISPNGSLSS SSFGWGPFHL GFHGSTDPEP GRCRRTDGKK WRCAKDAVHG  240
HKYCEKHLNR GRHRSRKPVE GQKPDQSVAG AANFANKVAP MASSLSKASV MPGGRSANGL  300
AAKGAHSTLN PFTDLITKRT QDLQGISMLS PAISLGSKDA SFAIPKPKDP FEESYQSEFG  360
FVSSDYLQNP YQKISSCLNS SFVDFSDQDS RDQHPLRQFM EDWPKERSEH SSLTWQDETK  420
PDWTKLSMAI PVVSSGLSSS ASSPTHERLA LSPLRLGLEF HQNEMGANEF GEPFPKDPAY  480
MPWGSSAGGP LGEVLKISSS KRPHIENPSG LNLMTKGWDG AKAQFEPSPT GVLLKSAFGS  540
LSNSSAGSSP RGESRMTSEA GSLCNDAPGS TTLVSSLPFS *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-69	GRF family protein