PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0022s0112.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 313aa    MW: 34689.5 Da    PI: 7.2208
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0022s0112.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.86.9e-12140187355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ++h ++Er+RR+++ + f  L  l+P +     kK++Ka++L ++v+++k+Lq
  Kaladp0022s0112.1.p 140 QNHIMAERKRRENLTQLFIALSALVPGL-----KKMDKASVLAETVKHLKQLQ 187
                          68**************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEDPSLINQW MMMSSYEDLS AVLPPAMSSA AAASSDDDHL QHSLLYRRQL TAVDDFDHFN  60
NRPAKQLKAS SWGSSCEPMP SPETQNKFSE DYFSTVNPPQ FTINRLDYPV WDNENTYVSK  120
PSHLRASGTN SAATRSSGAQ NHIMAERKRR ENLTQLFIAL SALVPGLKKM DKASVLAETV  180
KHLKQLQDRI KTLEDQIKSN KATDSRIRNP SVFSGEMFVK GAPDWQLPEI DARVCGRSVL  240
IRIIHCDKNK EGVIEKTLSE VAKLGLAVVS SNVLAFGGSA LHITIVAKMD AECCKTAEEL  300
VRTLRAAFMD FV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146151ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-41bHLH family protein