PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0022s0086.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 21554.2 Da PI: 8.6797 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.8 | 2.8e-18 | 103 | 151 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ r r++lg+f ta+eAa a+++a+ k++g Kaladp0022s0086.1.p 103 YRGVRQRP-SGKWAAEIRDPR----ReMRVWLGTFETAQEAALAYDRAAVKFHG 151 9*******.7*********82....47************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MTRLTPEQEM AAMVASLTHV VTGGYGSTSC NSGPFSAADS ACQICKVVRE CLGCGLSDFA 60 PPFDSGGQPV NEGSAPEVYG EGRNEAGNNC GSKKKRKKKN NNYRGVRQRP SGKWAAEIRD 120 PRREMRVWLG TFETAQEAAL AYDRAAVKFH GPRAKLNFIY PDTSATHCRS APPIAAQAVV 180 IPDQGASANA AEGGAGDGIM GMRG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 99 | KKKRKKK |
2 | 94 | 98 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 5e-28 | ERF family protein |