PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0022s0049.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 253aa MW: 28877 Da PI: 8.8623 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.8 | 1e-26 | 9 | 61 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT..SEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst..gklyeyss 51 k+ienk nrqvtfskRr+g++KKA ELSvLCda++a+i+fs + +klye++s Kaladp0022s0049.1.p 9 KKIENKVNRQVTFSKRRTGLFKKATELSVLCDAQIAIIVFSGDrpDKLYEFAS 61 68***************************************874579***986 PP | |||||||
2 | K-box | 79.9 | 6.2e-27 | 86 | 173 | 12 | 99 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++a+s ++e++kL+++ e Lqr+qR+llGedLe+Ls+keL+ Le+q+e sl + R +K++++ e +e l+k+e+ l e+nk+L++k + Kaladp0022s0049.1.p 86 REAQSAYHEVQKLQAKCEALQRTQRNLLGEDLEPLSIKELHALEKQIEVSLAQTRLRKTQVVNERMESLRKQERHLGEINKKLKMKKM 173 57899*******************************************************************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGRGRIEHKK IENKVNRQVT FSKRRTGLFK KATELSVLCD AQIAIIVFSG DRPDKLYEFA 60 SPGQRIGKIL ERYQSMVAPP PGGLHREAQS AYHEVQKLQA KCEALQRTQR NLLGEDLEPL 120 SIKELHALEK QIEVSLAQTR LRKTQVVNER MESLRKQERH LGEINKKLKM KKMEIEAEGE 180 AYHALWNTYN ASASAGTNFP LQPTHPNLME CEMAEPVLEM GYPQNHYVRE EGTTSRANNV 240 VDELNFIQGW HC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 4e-83 | MIKC_MADS family protein |