PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0021s0057.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 506aa    MW: 56581 Da    PI: 8.47
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0021s0057.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3764.4e-24127228199
                          EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                          f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F 
  Kaladp0021s0057.1.p 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI 214
                          99*****************************8544444..48************************************************ PP

                          E-SSSEE..EEEEE-S CS
                   B3  84 ldgrsefelvvkvfrk 99 
                            ++++ +l+++++r+
  Kaladp0021s0057.1.p 215 --WNDKNQLLLGIRRA 228
                          ..7888889****997 PP
2Auxin_resp122.23.7e-40253336183
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                          aahaast+s F+++YnPras+seFv+++ k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sd+dpvrWpnS+Wrs+k
  Kaladp0021s0057.1.p 253 AAHAASTNSRFNIFYNPRASPSEFVIPLTKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDSDPVRWPNSHWRSVK 336
                          79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    
MRLSSAGFSP QPQEGEKRVL NSELWHACAG PLVSLPTVGS RVVYFPQGHS EQVAATTNKE  60
VDGHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDP YLPADFGAPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAK DLHDNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNDKNQ LLLGIRRASR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAASTN SRFNIFYNPR ASPSEFVIPL TKYVKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DSDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSPFP FRLKRPWPAG LPSLNGFKEE DLGMNSPLMW LRGDNGQTLN FQGMGANPWM  420
QMQPRMDAML GRNHSQTQRM RTSPAPSPAH VDTNEPFQSR TICSTPVCHY CHPQAQLSPD  480
THQALYSPDS APSISYYHPA QSACS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein