PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0021s0009.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 360aa    MW: 38475.6 Da    PI: 6.0481
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0021s0009.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.57.4e-16178224455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           hn  E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  Kaladp0021s0009.1.p 178 VHNLSEKRRRSRINEKLKALQKLIPNS-----NKSDKASMLDEAIEYLKQLQ 224
                          6*************************7.....59*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MADLYGTNAY STTPSSSSAS LPLESEDLST FLQHLLHPSP ASSSCMPFRG KHASVLPSSF  60
VSAPEGLAAA GLLNSMDEDR DGVGRMGIGP SSFVAPSAGI NFADPGGYLA TGADDVSRKG  120
FSFVDGRTIG DQVDREFRLE KDSNEFRFEN ENGAGASITQ TNPVKSRSSS KRSRAAEVHN  180
LSEKRRRSRI NEKLKALQKL IPNSNKSDKA SMLDEAIEYL KQLQLQVQML SMRKGVSLHP  240
LCMPGVAQSL HLPPGGTSYG GGDDMLSRGN DMPNPISPTG TFTLNQEASV PPSFDISNHG  300
NSSNQSDPPP LNNNPNSEIA FGFNQSLEAH YKAFNFCSQS KDTSAEEILH LDSGNTMKG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.15e-38bHLH family protein