PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0020s0216.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 555aa MW: 61759.5 Da PI: 5.0899

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0020s0216.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.5	1.3e-14	356	402	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ Kaladp0020s0216.3.p 356 NHVLAERRRREKLNERFVILRSLVPFV-----TKMDKASILGDTIEYLKQLR 402 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MEIMKTDISD FLDLTICILD FFNVDHQSAR VQTVLCIPLV DGVVEFGSTE LIHEDLGLVR 60 HVKTFFNDYN QSQHTPPPKP ALSGHSTSNP TASSDHFHSQ PLLAMYNAGM SSNNNHANSH 120 NQNDEENENE EEEEEGPGLD SEAETARVSG RVGAEVSEFM HMEMSDQDIR VGSPEDASNN 180 LEPDVNLLSA SRFKNNKDDH FTSESYKIES ARRWALMQDQ MRSGAVQIQP PPFSETTPLL 240 EDLTQEDSHY SHTVSSILQN QRQPPLPDSS AGILILSADS AFAKWTLHGD QVTATTIIGG 300 AGAGSQWLLK YILFTIPYLH AKYHEENEPS KSVDMSEAAQ RLKKGAGTPQ EDMSANHVLA 360 ERRRREKLNE RFVILRSLVP FVTKMDKASI LGDTIEYLKQ LRRKIQDLEV KTKQMEVEQR 420 SGLTSQERTW SGSGSDKKKM RAVEGTGTPK PVKVVEPPPP RAVEPLAIMD ANTVQVSIIE 480 TDALVELQCP HREGLLLDVM MKLRELRIEV TAVQSSVTDG SFVAELRAKV KENVNGKKMK 540 IAEVKRAICE IIPQ*

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MEIMKTDISD FLDLTICILD FFNVDHQSAR VQTVLCIPLV DGVVEFGSTE LIHEDLGLVR  60
HVKTFFNDYN QSQHTPPPKP ALSGHSTSNP TASSDHFHSQ PLLAMYNAGM SSNNNHANSH  120
NQNDEENENE EEEEEGPGLD SEAETARVSG RVGAEVSEFM HMEMSDQDIR VGSPEDASNN  180
LEPDVNLLSA SRFKNNKDDH FTSESYKIES ARRWALMQDQ MRSGAVQIQP PPFSETTPLL  240
EDLTQEDSHY SHTVSSILQN QRQPPLPDSS AGILILSADS AFAKWTLHGD QVTATTIIGG  300
AGAGSQWLLK YILFTIPYLH AKYHEENEPS KSVDMSEAAQ RLKKGAGTPQ EDMSANHVLA  360
ERRRREKLNE RFVILRSLVP FVTKMDKASI LGDTIEYLKQ LRRKIQDLEV KTKQMEVEQR  420
SGLTSQERTW SGSGSDKKKM RAVEGTGTPK PVKVVEPPPP RAVEPLAIMD ANTVQVSIIE  480
TDALVELQCP HREGLLLDVM MKLRELRIEV TAVQSSVTDG SFVAELRAKV KENVNGKKMK  540
IAEVKRAICE IIPQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	361	366	ERRRRE
2	362	367	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-50	bHLH family protein