PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0020s0216.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 686aa MW: 75973.4 Da PI: 5.632

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0020s0216.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.1	1.8e-14	487	533	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ Kaladp0020s0216.1.p 487 NHVLAERRRREKLNERFVILRSLVPFV-----TKMDKASILGDTIEYLKQLR 533 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MTAVPPGSGG GRLQSLLQSS VQSIQWTYSL FWQLSPHNGN LVWADGYYNG AIKTRKTIQS 60 MEVSAEEASL QRSQQLRELY DSLSTGDQAS EAPARRPSAA LSPEDLTESE WFYLMCVSFS 120 FPLGVGLPGK AYARRQHVWL TGANEVESKV FSRAILAKSA RVQTVLCIPL VDGVVEFGST 180 ELIHEDLGLV RHVKTFFNDY NQSQHTPPPK PALSGHSTSN PTASSDHFHS QPLLAMYNAG 240 MSSNNNHANS HNQNDEENEN EEEEEEGPGL DSEAETARVS GRVGAEVSEF MHMEMSDQDI 300 RVGSPEDASN NLEPDVNLLS ASRFKNNKDD HFTSESYKIE SARRWALMQD QMRSGAVQIQ 360 PPPFSETTPL LEDLTQEDSH YSHTVSSILQ NQRQPPLPDS SAGILILSAD SAFAKWTLHG 420 DQVTATTIIG GAGAGSQWLL KYILFTIPYL HAKYHEENEP SKSVDMSEAA QRLKKGAGTP 480 QEDMSANHVL AERRRREKLN ERFVILRSLV PFVTKMDKAS ILGDTIEYLK QLRRKIQDLE 540 VKTKQMEVEQ RSGLTSQERT WSGSGSDKKK MRAVEGTGTP KPVKVVEPPP PRAVEPLAIM 600 DANTVQVSII ETDALVELQC PHREGLLLDV MMKLRELRIE VTAVQSSVTD GSFVAELRAK 660 VKENVNGKKM KIAEVKRAIC EIIPQ*

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MTAVPPGSGG GRLQSLLQSS VQSIQWTYSL FWQLSPHNGN LVWADGYYNG AIKTRKTIQS  60
MEVSAEEASL QRSQQLRELY DSLSTGDQAS EAPARRPSAA LSPEDLTESE WFYLMCVSFS  120
FPLGVGLPGK AYARRQHVWL TGANEVESKV FSRAILAKSA RVQTVLCIPL VDGVVEFGST  180
ELIHEDLGLV RHVKTFFNDY NQSQHTPPPK PALSGHSTSN PTASSDHFHS QPLLAMYNAG  240
MSSNNNHANS HNQNDEENEN EEEEEEGPGL DSEAETARVS GRVGAEVSEF MHMEMSDQDI  300
RVGSPEDASN NLEPDVNLLS ASRFKNNKDD HFTSESYKIE SARRWALMQD QMRSGAVQIQ  360
PPPFSETTPL LEDLTQEDSH YSHTVSSILQ NQRQPPLPDS SAGILILSAD SAFAKWTLHG  420
DQVTATTIIG GAGAGSQWLL KYILFTIPYL HAKYHEENEP SKSVDMSEAA QRLKKGAGTP  480
QEDMSANHVL AERRRREKLN ERFVILRSLV PFVTKMDKAS ILGDTIEYLK QLRRKIQDLE  540
VKTKQMEVEQ RSGLTSQERT WSGSGSDKKK MRAVEGTGTP KPVKVVEPPP PRAVEPLAIM  600
DANTVQVSII ETDALVELQC PHREGLLLDV MMKLRELRIE VTAVQSSVTD GSFVAELRAK  660
VKENVNGKKM KIAEVKRAIC EIIPQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	492	497	ERRRRE
2	493	498	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	8e-77	bHLH family protein