PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0020s0108.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 335aa    MW: 36532.2 Da    PI: 8.5495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0020s0108.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-10229276455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L+el+P +    sk   Ka +L + ++Y++sLq
  Kaladp0020s0108.1.p 229 SHSLAERVRREKISERMKYLQELVPGC----SKITGKAGMLDEIINYVQSLQ 276
                          8**************************....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MMLHCVNTSG GVSGGAELSV LERQRAHMKW QQQQQGLEYG NVHSVLPGYG GVGNQVQGQV  60
CGDSGVGQVG FPVVKPETGL DGTWTGFGNY GMPSVEDFMS CGYEDNSGAE YSYQMMNKAS  120
CPVEISEGRG SILSGRTNLG DAEGAKKRKA ENPASLKAVA DTGTKEKKIK EWAEDGESKI  180
TQPNTSINSK SKNKREASAD ASKDNPKVPE VQKTDYIHVR ARRGQATDSH SLAERVRREK  240
ISERMKYLQE LVPGCSKITG KAGMLDEIIN YVQSLQRQVE FLSMKLATVN PQLNFSIGSL  300
FGKEVFGPCT SSYPTLGKFN LKFIFLIQSH FIFH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.11e-55bHLH family protein