PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0019s0030.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 336aa MW: 37453.6 Da PI: 6.791

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0019s0030.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	6.2e-13	154	199	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++N++f L ++P + +K++Ka++Le+A++++k+Lq Kaladp0019s0030.1.p 154 HIKAERKRREKLNQRFIALSAVIPGL-----TKMDKATVLEEATKFVKQLQ 199 999********************9.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MDQDQIFTSQ WMVNSHADLS GPIPMEAAFP DALQHSNLLF DYPLPPIFGT TMNDFQSNNP 60 VEHLATDTWR SLDVSNSDSA ADAVSFLNSA WPNPTGVAWP KREYHCYDSQ VQQFPNNEYT 120 IWNENYGSKA GPEAKSKAIH NISAATRSSE AADHIKAERK RREKLNQRFI ALSAVIPGLT 180 KMDKATVLEE ATKFVKQLQE RIKKLEKQTK SGTVIESAVV VKKTLLVIND NNMPGFSNET 240 SFNERTLPDE SLPEIEVRFC HRKVLIRVHC DRKKGVAEKI LSEIGNLHMT VLNNSVFAFG 300 SSAINVVVIA KMNPECSMAE TELVKTLCVA LKSLM*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	158	163	ERKRRE
2	159	164	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	6e-49	bHLH family protein