PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0019s0029.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 343aa MW: 38632.8 Da PI: 7.6268

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0019s0029.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.7e-12	158	203	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + +K++Ka+ Le A++Y+k+Lq Kaladp0019s0029.1.p 158 HIKAERKRREKLSQRFIALSAVIPGL-----TKMDKATLLEDATKYVKQLQ 203 999********************9.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MDQVIRIRYL PASQWMVNSH ADLSGSIPME PAFPDAFQPS YLLFDYPQPP IFGTTMNDFQ 60 SNNPVENLAT DTWRSRDVST SDSASDAVSF SYSAWPNPTG VAWPKREYHC YDNQVQQFPN 120 NEYTIWNENY VSKAGPEAKR KAIRNISAAT RSSEAEDHIK AERKRREKLS QRFIALSAVI 180 PGLTKMDKAT LLEDATKYVK QLQEQIKKLE KQTKSPTMIE SAVVVKKTLL EINDNNMPGF 240 SNETSFNERT LLDESLPEIE ARFCDRKVLI RVHCDRKKGV AEKILSEIGK LHMTVLNSSV 300 LAFGSSAIIV AVIAKVKFEF NATESHHNSI NTNVPNLVTT LQ*

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MDQVIRIRYL PASQWMVNSH ADLSGSIPME PAFPDAFQPS YLLFDYPQPP IFGTTMNDFQ  60
SNNPVENLAT DTWRSRDVST SDSASDAVSF SYSAWPNPTG VAWPKREYHC YDNQVQQFPN  120
NEYTIWNENY VSKAGPEAKR KAIRNISAAT RSSEAEDHIK AERKRREKLS QRFIALSAVI  180
PGLTKMDKAT LLEDATKYVK QLQEQIKKLE KQTKSPTMIE SAVVVKKTLL EINDNNMPGF  240
SNETSFNERT LLDESLPEIE ARFCDRKVLI RVHCDRKKGV AEKILSEIGK LHMTVLNSSV  300
LAFGSSAIIV AVIAKVKFEF NATESHHNSI NTNVPNLVTT LQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	162	167	ERKRRE
2	163	168	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-41	bHLH family protein