PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0018s0302.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 328aa    MW: 35693.1 Da    PI: 6.5659
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0018s0302.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.5e-173280355
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  Kaladp0018s0302.1.p 32 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 80
                         56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MAQTFAILQR NTSPVQSSER RGKRKQAEPG RFLGVRRRPW GRYAAEIRDP TTKERHWLGT  60
FDTAHEAALA YDRAALSMKG TQARTNFLYS NNTTFHSLLT TPFDALIPSS QFLITTTHSM  120
KPQQQPSISQ NILIPCQTNQ WQQSHDHSLH GAAATAQPES DMCSGETSES QQMSESYDNA  180
AGAGFFFSSS DTNSGYLDSI VPDSLLKPPS SPGSTNSKYT HLNSSSYDRN SGATHHQMHS  240
HYCDNNVFQM DSVPGGGYGY QDTTCNCNGF DKSELSAMVN NPLMVEDGCM GALYPMIGNP  300
AGSSSSSSYQ ANPSGSHFGD VGSYSLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-54ERF family protein